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Job DescriptionP0AB77
Confidence99.98%DateThu Jan 5 11:14:48 GMT 2012
Rank76Aligned Residues318
% Identity16%Templatec3dr4B_
PDB info PDB header:transferaseChain: B: PDB Molecule:putative perosamine synthetase; PDBTitle: gdp-perosamine synthase k186a mutant from caulobacter2 crescentus with bound sugar ligand
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   58.60.........70.........80.........90.........100.........110.........120.. .......130......
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Query Sequence  HPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETL. LGAEDAIISDALNH
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Template Sequence  DGNERDYVLECMDTTWISSVG. . . . . . . . RFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTY
Template Known Secondary structure 
SST

SS
S........T
SS
T

TT
SSS
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   15....20.........30..... ....40.........50.........60.........70.........80......
 
   137..140.........150.........160.........170.........180.........190.........200.........210......
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Query Sequence  ASIIDGVRLCKAKRYRYANNDMQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVG
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Template Sequence  IASANSVTYCGATPVLVDNDPRTFNLDAAKLEALITPRTK. . . AIMPVHLYGQICDMDPILEVARRHNLLVIEDAAEAVG
Template Known Secondary structure  TTT

B
TTT
SB
GGGTGGG

TT...

B
GGG



TT

TT
TT
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   87..90.........100.........110.........120...... ...130.........140.........150.........160...
 
   217..220.........230.........240.........250.........260....... ..270.........280......
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Query Sequence  FVGENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQR. . . . . . . . . . SRPYLFSNSLAPAIVAASI
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Template Sequence  ATYRGKKSG. . . . . SLGDCATFSFFGNAIITTGEGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAA
Template Known Secondary structure 
TTTT.....SSSS
BTTSSS

BS
S
BTT

TTSTT

SS


B
B

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   164.....170.. .......180.........190.........200.........210.........220.........230........
 
   287..290.........300.........310.........320...... ...330.........340.........350......
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Query Sequence  KVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHA. . . . . . . . . . IIPVMLGDAVVAQKFARELQKEGIYVTGFF
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Template Conservation                            
                                     
   
   

 
    
Template Sequence  IGLAQLERVDEHLAARERVVGWYEQKLARLGNRVTKPHVALTGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVF
Template Known Secondary structure  TGGGGGGG




TTS



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   239240.........250.........260.........270.........280.........290.........300.........310........
 
   357..360.. .......370.........380.........390.
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Query Sequence  YPVVPK. . . . . . . . . . . . . . . . . GQARIRTQMSAAHTPEQITRAVEAFTRIG
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Template Sequence  HPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHAGLTEADIDRVIAALDQVL
Template Known Secondary structure 

GGGSGGGGGG

TT



TT


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   319320.........330.........340.........350.........360.........370
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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