Job Description P0AB77 Confidence 100.00% Date Thu Jan 5 11:14:48 GMT 2012 Rank 18 Aligned Residues 362 % Identity 17% Template c3bv0A_ PDB info PDB header:transferase Chain: A: PDB Molecule:adenosylmethionine-8-amino-7-oxononanoate aminotransferase; PDBTitle: crystal structure of plp bound 7,8-diaminopelargonic acid synthase in2 mycobacterium tuberculosis Resolution 2.21 Å

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		11	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.				.	.	40	.	.	.	.	.	.	.	.	.				50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure														.																.	.	.													.	.	.
Query SS confidence														.																.	.	.													.	.	.
Query Sequence		N	D	L	E	T	A	R	A	E	G	L	F	.	K	E	E	R	I	I	T	S	A	Q	Q	A	D	I	T	.	.	.	V	A	D	G	S	H	V	I	N	F	C	A	.	.	.	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C
Query Conservation														.																.	.	.													.	.	.
Alig confidence														.																.	.	.													.	.	.						.																											.	.
Template Conservation																																																					.																											.	.
Template Sequence		E	Q	I	I	A	V	D	G	A	H	L	W	H	P	S	P	V	V	A	V	A	A	H	G	A	W	L	T	L	I	R	D	G	Q	P	I	E	V	L	D	A	M	S	S	W	W	T	A	I	H	G	.	H	G	H	P	A	L	D	Q	A	L	T	T	Q	L	R	V	M	N	H	V	M	F	G	G	L	T	.	.
Template Known Secondary structure																									B	T							T	T								T	T					T		T	T		.	B	T																S				S	S	S			.	.
Template Predicted Secondary structure																																																					.																											.	.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.										.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																			.	.																								.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.																								.	.	.	.	.	.	.	.	.
Query Sequence		G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	.	.	G	M	E	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	L	L	.	.	.	.	.	.	.	.	.	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R
Query Conservation																			.	.																								.	.	.	.	.	.	.	.	.
Alig confidence		.	.																.	.																								.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	H	E	P	A	A	R	L	A	K	L	L	V	D	I	T	P	A	G	L	D	T	V	F	F	S	D	S	G	S	V	S	V	E	V	A	A	K	M	A	L	Q	Y	W	R	G	R	G	L	P	G	K	R	R	L	M	T	W	R	G	G	Y	H	G	D	T	F	L	A	M	S	I	C	D	P	H	G	G	M
Template Known Secondary structure		.	.															S	S	T	T								S	S																		T	T	T		T	T								T	T					S	S					T	T	S		T	T	T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
																						153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.											.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.											.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	.	V	F	S	M	D	G	V	I	A	N	.	.	.	.	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.											.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.										.											.	.	.	.
Template Conservation																																								.	.	.
Template Sequence		H	S	L	W	T	D	V	L	A	A	Q	V	F	A	P	Q	V	P	R	D	Y	D	P	A	Y	S	A	A	F	E	A	Q	L	A	Q	H	A	G	.	.	.	E	L	A	A	V	V	V	E	P	V	V	Q	G	A	G	G	M	R	F	H	D	P	R	Y	L	H	D	L	R	D	I	C	R	R	Y	E	V	L	L
Template Known Secondary structure		G	G	G	G	T	T	T	S											S	S																	G	G	.	.	.	G								S	S				T	T	T						T														T
Template Predicted Secondary structure																																								.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K
Query Conservation
Alig confidence									.																			.	.																															.	.	.
Template Conservation									.																			.	.																															.	.	.
Template Sequence		I	F	D	E	I	A	T	.	G	F	G	R	T	G	A	L	F	A	A	D	H	A	G	V	S	P	.	.	D	I	M	C	V	G	K	A	L	T	G	G	Y	L	S	L	A	A	T	L	C	T	A	D	V	A	H	T	I	S	.	.	.	A	G	P	T	F	M	A	N	P	L	A	C	A	V	S	V	A	S	V
Template Known Secondary structure						T	T	T	.	T	T	T	T	T	S	S	S	S	G	G	G	G	T	T				.	.	S						G	G	G	G	T	T	S	S																	.	.	.				T	T	T	T
Template Predicted Secondary structure									.																			.	.																															.	.	.
Template SS confidence
		252	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	.	A	G	A	D	H	A	I	I	P	V	M	L	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R
Query Conservation																																			.
Alig confidence																																			.																																					.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.
Template Sequence		E	L	L	L	G	Q	D	W	R	T	R	I	T	E	L	A	A	G	L	T	A	G	L	D	T	A	R	A	L	P	A	V	T	D	V	R	V	C	G	A	I	G	V	I	E	C	D	R	P	V	D	L	A	V	A	T	P	A	A	L	D	R	G	V	W	L	R	P	F	R	.	.	.	.	.	.	.	.	N	L
Template Known Secondary structure						T	T	T																	G	G	G	G	G		T	T								T	T							S	S													T	T	T						B	T	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.									.	.
		367	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	A	M	P	P	Y	I	C	T	P	A	E	I	T	Q	I	T	S	A	M	V	E	V	A	R	L	V
Template Known Secondary structure								T	T																			T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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