Job Description P0AB77 Confidence 99.96% Date Thu Jan 5 11:14:48 GMT 2012 Rank 120 Aligned Residues 341 % Identity 13% Template c3asaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:ll-diaminopimelate aminotransferase; PDBTitle: crystal structure of apo-ll-diaminopimelate aminotransferase from2 chlamydia trachomatis Resolution 2.05 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		G	S	H	V	I	N	F	C	A	N	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	.	.	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	G	M	E	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L
Query Conservation																																										.	.
Alig confidence														.																												.	.
Template Conservation														.
Template Sequence		Q	H	T	V	I	N	L	S	I	G	D	T	.	T	Q	P	L	N	A	S	V	A	E	A	F	A	S	S	I	A	R	L	S	S	P	T	T	C	R	G	Y	G	P	D	F	G	L	P	A	L	R	Q	K	L	S	E	D	F	Y	R	G	F	V	D	A	K	E	I	F	I	S	D	G	A	K	V	D	L	F	R
Template Known Secondary structure		T	S						S	S				.																				T	S	S	S								T	T												T	T	S	T	T	S	S		G	G	G					S
Template Predicted Secondary structure														.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.				.	.	.	.
Predicted Secondary structure																																																																											.	.	.
Query SS confidence																																																																											.	.	.
Query Sequence		F	E	T	L	L	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	.	.	.	N	L	K	G
Query Conservation																																																																											.	.	.
Alig confidence																																														.	.	.																											.	.	.
Template Conservation																																														.	.	.
Template Sequence		L	L	S	F	F	G	P	N	Q	T	V	A	I	Q	D	P	S	Y	P	A	Y	L	D	I	A	R	L	T	G	A	K	E	I	I	A	L	P	C	L	Q	E	N	A	F	.	.	.	F	P	E	F	P	E	D	T	H	I	D	I	L	C	L	C	S	P	N	N	P	T	G	T	V	L	N	K	D	Q	L	R	A
Template Known Secondary structure								S	S								S												T	T		S									G	G	G	T	T	.	.	.						T	T				S						S	S		T	T	T
Template Predicted Secondary structure																																														.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																					.	.																											.
Query SS confidence																																																					.	.																											.
Query Sequence		V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	.	.	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	.
Query Conservation																																																					.	.																											.
Alig confidence																																																					.	.																											.
Template Conservation
Template Sequence		I	V	H	Y	A	I	E	H	E	I	L	I	L	F	D	A	A	Y	S	T	F	I	S	D	P	S	L	P	K	S	I	F	E	I	P	D	A	R	F	C	A	I	E	I	N	S	F	S	K	P	L	G	F	A	G	I	R	L	G	W	T	V	I	P	Q	E	L	T	Y	A	D	G	H	F	V	I	Q	D	W	E
Template Known Secondary structure									T	T								T	T	G	G	G				T	T	S		S	S	G	G	G	S	T	T	G	G	G	T									G	G	G	T	T	T	T										T	T		B		T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
						273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.		.	.	.	.	.	.	.	.	330	.	.	.	.		.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																																		.														.
Query SS confidence		.	.	.	.																																																		.														.
Query Sequence		.	.	.	.	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G	F	T	L	A	.	G	A	D	H	A	I	I	P	V	M	L	G	D	.	A	V	V	A	Q	K	F	A	R	E	L	Q
Query Conservation		.	.	.	.																																																		.														.
Alig confidence		.	.	.	.																																																		.														.
Template Conservation
Template Sequence		R	F	L	S	T	T	F	N	G	A	S	I	P	A	Q	E	A	G	V	A	G	L	S	I	L	P	Q	L	E	A	I	H	Y	Y	R	E	N	S	D	L	L	R	K	A	L	L	A	T	G	F	E	V	F	G	G	E	H	A	P	Y	L	W	V	K	P	T	Q	A	N	I	S	D	R	D	L	F	D	F	F	L
Template Known Secondary structure																										T	T	T																					T	T							S	S	S	S									T	T			T	T	T
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		347	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		K	E	.	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T
Query Conservation				.
Alig confidence				.												.													.	.
Template Conservation																.													.	.
Template Sequence		R	E	Y	H	I	A	I	T	P	G	I	G	F	G	.	R	S	G	S	G	F	V	R	F	S	S	L	.	.	G	K	R	E	D	I	L	A	A	C	E	R	L	Q
Template Known Secondary structure					S						G	G	G	G		.	G	G	G	T	T								.	.	S
Template Predicted Secondary structure																.													.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions