Job Description P0AB77 Confidence 100.00% Date Thu Jan 5 11:14:48 GMT 2012 Rank 27 Aligned Residues 348 % Identity 17% Template c2zsmA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-2 aminomutase from aeropyrum pernix, hexagonal form Resolution 2.30 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																											.											.
Query SS confidence																											.											.
Query Sequence		K	E	E	R	I	I	T	S	A	Q	Q	A	D	I	T	V	A	D	G	S	H	V	I	N	F	.	C	A	N	N	Y	L	G	L	A	N	.	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L
Query Conservation																											.											.
Alig confidence																											.											.																			.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.
Template Sequence		P	Y	P	F	Y	V	K	R	G	E	G	A	Y	L	Y	T	V	D	G	A	R	I	V	D	L	V	L	A	Y	G	P	L	I	L	G	H	K	H	P	R	V	L	E	A	V	E	E	A	L	A	R	G	W	L	Y	.	.	.	.	.	.	.	G	A	P	G	E	A	E	V	L	L	A	E	K	I	L	G	Y	V
Template Known Secondary structure		S	S									B	T					T	T							S	S	G	G	G	T	T		T	T		B	S													T	T		S			.	.	.	.	.	.	.	S	S			S
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
			101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.														150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure		.																				.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																				.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	G	M	E	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	.	.	.	E	T	L	L	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A
Query Conservation		.																				.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																				.	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	G	G	M	I	R	F	V	N	S	G	T	E	A	T	M	T	A	I	R	L	A	R	G	Y	T	G	R	D	L	I	L	K	F	D	G	C	Y	H	G	S	H	D	A	V	L	V	A	A	G	G	V	P	T	S	A	G	V	P	E	A	V	A	R	L	T	L	V	T	P	Y	N	D	V	E	A	L	E	R
Template Known Secondary structure			T	T							S	S																										T					S	S	G	G	G	S								S	S	T	T							T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	.	.	.	.	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T
Query Conservation																															.	.	.	.
Alig confidence									.	.	.																				.	.	.	.																													.	.	.	.
Template Conservation									.	.	.																																																				.	.	.	.
Template Sequence		V	F	A	E	Y	G	D	.	.	.	R	I	A	G	V	I	V	E	P	V	I	A	N	A	G	V	I	P	P	R	R	E	F	L	A	A	L	Q	R	L	S	R	E	S	G	A	L	L	I	L	D	E	V	V	T	G	F	R	L	G	L	.	.	.	.	E	G	A	Q	G	Y	F	N	I	E	G	D	I	I	V
Template Known Secondary structure							G	G	.	.	.	G								S	S	B		S	S	S		B																		T								T	T	T	T	T	T	S	S	T	.	.	.	.	T							T				S
Template Predicted Secondary structure									.	.	.																																																				.	.	.	.
Template SS confidence
		196	.	.	.	200	.	.				.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.					.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence										.																																																																				.	.	.	.
Template Conservation										.
Template Sequence		L	G	K	I	I	G	G	G	.	F	P	V	G	A	V	A	G	S	R	E	V	M	S	L	L	T	P	Q	G	K	V	F	N	A	G	T	F	N	A	H	P	I	T	M	A	A	G	L	A	T	L	K	A	L	E	E	E	P	V	Y	S	V	S	R	E	A	A	K	A	L	E	E	A	A	S	E	V	L	D	R
Template Known Secondary structure				G	G	G	G	T	T	.	S	S												T	T	B	T	T	T	S	S	B					T	T	T	T																		S																						T	T
Template Predicted Secondary structure										.
Template SS confidence
		269	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
			316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.														.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure		.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	A	G	F	T	L	A	G	A	D	H	A	I	I	P	V	M	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T
Query Conservation		.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																			.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.
Template Sequence		T	G	L	P	Y	T	I	N	R	V	E	S	M	M	Q	L	F	I	G	V	E	E	V	S	N	A	A	Q	A	R	K	A	D	K	K	F	Y	V	K	L	H	E	E	M	L	R	R	G	V	F	I	A	P	S	.	.	.	.	.	.	.	.	.	N	L	E	A	V	F	T	G	L	P	H	Q	G	E	A	L	E
Template Known Secondary structure		S	S									T	T							T		S			S	S					T	T	S															T	T					S	S	.	.	.	.	.	.	.	.	.	T	T	S						T	T		S
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.										.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		382	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	V	E	A	F	T	R	I	G	K	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	V	E	G	L	R	S	S	L	K	T	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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