 |
Job Description | P0AB77 | Confidence | 20.77% | Date | Thu Jan 5 11:14:48 GMT 2012 |
Rank | 383 | Aligned Residues | 68 |
% Identity | 3% | Template | c2yvqA_ |
PDB info |
PDB header:ligase | Chain: A: PDB Molecule:carbamoyl-phosphate synthase; |
PDBTitle: crystal structure of mgs domain of carbamoyl-phosphate2 synthetase from homo sapiens
|
Resolution | 1.98 Å |
|
 |
  |   |
137 | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | |
|
. | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | S | I | I | D | G | V | R | L | C | K | A | K | R | Y | R | Y | . |
. |
A | N | N | D | M | Q | E | L | E | A | R | L | K | E | A | R | E | A | G | A | R | H | V | L | I | A | T | D | G | V | F | S | M | D | G | V | I | A | N | L | K | G | V | C | D | L | A | D | K | Y | D | A | L | V | M | V | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |   |
|   |   |   |
|
|   |
|   |   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   | . | . | . | . | . | . |
|   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |
|
|   |   |   |
|
|
|   |
|   |
Template Sequence |   |
E | A | T | S | D | W | L | N | A | N | N | V | P | A | T | P | V | A | W | P | S | Q | E | L | S | S | I | R | K | L | I | R | D | . |
. |
. |
. |
. |
. |
G | S | I | D | L | V | I | N | L | P | N | N | N | T | K | F | V | H | D | N | Y | V | I | R | R | T | A | V | D | S | G | I | P | L | L | T | N |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |  |
|
| G | G | G |
|
| B |
|  |  |  |  |  |  | T | . | . | . | . | . | . | T | S |
|
|  |  |  |  |
|
|
|
|
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |
| S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1392 | . | . | . | . | . | . | . | 1400 | . | . | . | . | . | . | . | . | . | 1410 | . | . | . | . | . | . | . | . | . | 1420 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 1430 | . | . | . | . | . | . | . | . | . | 1440 | . | . | . | . | . | . | . | . | . | 1450 | . | . | . | . | . | . | . | . | . | 1460 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|