Job Description P0AB77 Confidence 100.00% Date Thu Jan 5 11:14:48 GMT 2012 Rank 19 Aligned Residues 353 % Identity 16% Template c2ordA_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase (ec 2.6.1.11)2 (acoat) (tm1785) from thermotoga maritima at 1.40 a resolution Resolution 1.40 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		F	K	E	E	R	I	I	T	S	A	Q	Q	A	D	I	T	V	A	D	G	S	H	V	I	N	F	C	A	N	.	.	.	N	Y	L	G	L	A	N	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H	G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A
Query Conservation																															.	.	.
Alig confidence																															.	.	.					.																							.	.	.	.	.
Template Conservation																																						.																							.	.	.	.	.
Template Sequence		S	R	F	P	A	T	F	V	Y	G	K	G	S	W	I	Y	D	E	K	G	N	A	Y	L	D	F	T	S	G	I	A	V	N	V	L	G	.	H	S	H	P	R	L	V	E	A	I	K	D	Q	A	E	K	L	I	H	C	S	N	.	.	.	.	.	L	F	W	N	R	P	Q	X	E	L	A	E	L	L	S	K
Template Known Secondary structure					S								B	T					T	T							S	S					T		T	T		.	B	T																S				T	.	.	.	.	.	T	S
Template Predicted Secondary structure																																						.																							.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.										.	.	.	.	.	.	.	160	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Query Sequence		F	L	G	M	E	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	.	.	.	.	.	.	.	.	E	T	L	L	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A	K	R	Y	R	.	.	.	.	.	.	.	.	.	Y	A	N	N	D	M	Q	E	L
Query Conservation																							.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	T	F	G	G	K	V	F	F	A	N	T	G	T	E	A	N	E	A	A	I	K	I	A	R	K	Y	G	K	K	K	S	E	K	K	Y	R	I	L	S	A	H	N	S	F	H	G	R	T	L	G	S	L	T	A	T	G	Q	P	K	Y	Q	K	P	F	E	P	L	V	P	G	F	E	Y	F	E	F	N	N	V
Template Known Secondary structure		T	T	T	S							S	S																					T	T								B	T					S	S							S	B						G	G	G		S			T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.
Query SS confidence																																	.	.	.	.
Query Sequence		E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	.	.	.	.	L	K	G	V	C	D	L	A	D	K	Y	D	A	L	V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I
Query Conservation																																	.	.	.	.
Alig confidence											.	.	.																				.	.	.	.																						.
Template Conservation											.	.	.																																													.
Template Sequence		E	D	L	R	R	K	X	S	E	.	.	.	D	V	C	A	V	F	L	E	P	I	Q	G	E	S	G	I	V	P	A	T	K	E	F	L	E	E	A	R	K	L	C	D	E	Y	D	A	L	L	V	F	D	E	V	Q	.	C	G	X	G	R	T	G	K	L	F	A	Y	Q	K	Y	G	V	V	P	D	V	L	T
Template Known Secondary structure										T	.	.	.	T								S				T	T	T																				T								T	T	.	T	T	T	T	T	T	S	S	S	S						T				S
Template Predicted Secondary structure											.	.	.																																													.
Template SS confidence
		162	.	.	.	.	.	.	.	170				.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I	K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	G
Query Conservation
Alig confidence								.	.	.
Template Conservation								.	.	.
Template Sequence		T	A	K	G	L	G	.	.	.	G	G	V	P	I	G	A	V	I	V	N	E	R	A	N	V	L	E	P	G	D	H	G	T	T	F	G	G	N	P	L	A	C	R	A	G	V	T	V	I	K	E	L	T	K	E	G	F	L	E	E	V	E	E	K	G	N	Y	L	X	K	K	L	Q	E	X	K	E	E	Y	D
Template Known Secondary structure				G	G	G	G	.	.	.	T	T	S									S	T	T					T	T	S	S			S	S	T	T																T	S	T	T																								T
Template Predicted Secondary structure								.	.	.
Template SS confidence
		238	.	240	.	.	.				.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		318	.	320		.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		F	T	L	.	A	G	A	D	H	A	I	I	P	V	M	L	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E	G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G	K	Q	L
Query Conservation					.
Alig confidence					.																																						.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		V	V	A	D	V	R	G	X	G	L	X	I	G	I	Q	F	R	E	E	V	S	N	R	E	V	A	T	K	C	F	E	N	K	L	L	V	V	P	A	G	N	.	.	.	.	.	.	.	N	T	I	R	F	L	P	P	L	T	V	E	Y	G	E	I	D	L	A	V	E	T	L	K	K	V	L	Q	G	I
Template Known Secondary structure		T								T	T								T	T	S												T	T							T	T	.	.	.	.	.	.	.	T								T	T																			T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.								.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions