Job Description P0AB77 Confidence 100.00% Date Thu Jan 5 11:14:48 GMT 2012 Rank 15 Aligned Residues 368 % Identity 17% Template c2e7uA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate-1-semialdehyde 2,1-aminomutase; PDBTitle: crystal structure of glutamate-1-semialdehyde 2,1-aminomutase from2 thermus thermophilus hb8 Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.							.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure															.	.	.	.	.	.																																			.											.
Query SS confidence															.	.	.	.	.	.																																			.											.
Query Sequence		M	R	G	E	F	Y	Q	Q	L	T	N	D	L	.	.	.	.	.	.	E	T	A	R	A	E	G	L	F	K	E	E	R	I	I	T	S	A	Q	Q	A	D	I	T	V	A	D	G	S	H	V	I	N	F	.	C	A	N	N	Y	L	G	L	A	N	.	H	P	D	L	I	A	A	A	K	A	G	M	D	S	H
Query Conservation															.	.	.	.	.	.																																			.											.
Alig confidence															.	.	.	.	.	.																																			.											.
Template Conservation
Template Sequence		I	S	E	A	Y	F	Q	E	A	K	R	H	I	P	G	G	V	S	S	P	V	R	A	F	K	A	V	G	G	T	P	P	F	L	V	R	G	E	G	A	Y	V	W	D	A	D	G	N	R	Y	L	D	Y	V	M	S	W	G	P	L	I	L	G	H	A	H	P	K	V	L	A	R	V	R	E	T	L	E	R	G
Template Known Secondary structure														S	G	G	G	S	S	S	G	G	G	G		T	T	T		S										B	T					T	T							S	S	G	G	G	T	T		T	T		B	T														T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.																								.	.	.
Query SS confidence																														.																								.	.	.
Query Sequence		G	F	G	M	A	S	V	R	F	I	C	G	T	Q	D	S	H	K	E	L	E	Q	K	L	A	A	F	L	.	G	M	E	D	A	I	L	Y	S	S	C	F	D	A	N	G	G	L	F	E	T	L	L	.	.	.	G	A	E	D	A	I	I	S	D	A	L	N	H	A	S	I	I	D	G	V	R	L	C	K	A
Query Conservation																														.																								.	.	.
Alig confidence					.	.	.	.	.	.	.																			.																								.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		L	T	F	.	.	.	.	.	.	.	G	A	P	S	P	L	E	V	A	L	A	K	K	V	K	R	A	Y	P	F	V	D	L	V	R	F	V	N	S	G	T	E	A	T	M	S	A	L	R	L	A	R	G	Y	T	G	R	P	Y	I	V	K	F	R	G	N	Y	H	G	H	A	D	G	L	L	V	E	A	G	S
Template Known Secondary structure		S			.	.	.	.	.	.	.	S	S																	T	T								S	S																									T	T							G	G	G	S					S
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		85	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
																					149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	R	Y	R	Y	A	N	N	D	M	Q	E	L	E	A	R	L	K	E	A	R	E	A	G	A	R	H	V	L	I	A	T	D	G	V	F	S	M	D	G	V	I	A	N	L	K	.	.	.	G	V	C	D	L	A	D	K	Y	D	A	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																															.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.																						.	.	.
Template Conservation																																											.	.	.
Template Sequence		G	A	L	T	L	G	V	P	S	S	A	G	V	P	E	E	Y	A	K	L	T	L	V	L	E	Y	N	D	P	E	G	L	R	E	V	L	K	R	R	G	E	.	.	.	E	I	A	A	I	I	F	E	P	V	V	G	N	A	G	V	L	V	P	T	E	D	F	L	K	A	L	H	E	A	K	A	Y	G	V	L
Template Known Secondary structure		S	S			B				S	S	T	T							T	T						T	T													G	G	.	.	.	G								S	S	B		T	T	S		B													G	G	G	G	T
Template Predicted Secondary structure																																											.	.	.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.				.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	M	V	D	D	S	H	A	V	G	F	V	G	E	N	G	R	G	S	H	E	Y	C	D	V	M	G	R	V	D	I	I	T	G	T	L	G	K	A	L	G	G	A	S	G	G	Y	T	A	A	R	K	E	V	V	E	W	L	R	Q	R	S	R	P	Y	L	F	S	N	S	L	A	P	A	I	V	A	A	S	I
Query Conservation
Alig confidence																									.	.	.	.
Template Conservation																									.	.	.	.
Template Sequence		L	I	A	D	E	V	M	T	G	F	R	L	A	F	G	G	A	T	E	L	L	G	L	.	.	.	.	K	P	D	L	V	T	L	G	K	I	L	G	G	G	L	P	A	A	A	Y	A	G	R	R	E	I	M	E	K	V	A	P	L	G	P	V	Y	Q	A	G	T	L	S	G	N	P	L	A	M	A	A	G	L
Template Known Secondary structure							T	T	T	T	T	T	S	S	T	T							T		.	.	.	.			S						G	G	G	G	T	T	S	S												T	T	B	T	T	T	S	S	B					T	T		S
Template Predicted Secondary structure																									.	.	.	.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.					.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.						.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.														.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	L	E	M	V	E	A	G	S	E	L	R	D	R	L	W	A	N	A	R	Q	F	R	E	Q	M	S	A	A	.	.	.	.	.	G	F	T	L	A	G	A	D	H	A	I	I	P	V	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	A	V	V	A	Q	K	F	A	R	E	L	Q	K	E
Query Conservation																																.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	T	L	E	L	L	E	E	N	P	G	Y	Y	A	Y	L	E	D	L	G	A	R	L	E	A	G	L	K	E	V	L	K	E	K	G	L	P	H	T	V	N	R	V	G	S	M	I	T	V	F	F	T	E	G	P	V	V	T	F	Q	D	A	R	R	T	D	T	E	L	F	K	R	F	F	H	G	L	L	D	R
Template Known Secondary structure											T																								T	T									T	T						S	S	S	S				S					T	T	S														T	T
Template Predicted Secondary structure
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	Y	V	T	G	F	F	Y	P	V	V	P	K	G	Q	A	R	I	R	T	Q	M	S	A	A	H	T	P	E	Q	I	T	R	A	V	E	A	F	T	R	I	G
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.
Template Sequence		G	I	Y	W	P	P	S	.	.	.	.	.	.	.	.	.	N	F	E	A	A	F	L	S	V	A	H	R	E	E	D	V	E	K	T	L	E	A	L	R	K	A	L
Template Known Secondary structure		T					S	S	.	.	.	.	.	.	.	.	.	S	S	S						T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.
Template SS confidence
		391	.	.	.	.	.	.										.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.