Return to main results Retrieve Phyre Job Id

Job DescriptionP27128
Confidence39.47%DateThu Jan 5 11:43:15 GMT 2012
Rank23Aligned Residues43
% Identity14%Templated1w7pd2
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Vacuolar sorting protein domain
Resolution3.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   167..170.........180.........190.........200.........210.
Predicted Secondary structure 












Query SS confidence 












































Query Sequence  KRAHSLGVAGIAKGYFNSGFLLINTAQWAAQQVSARAIAMLNEPE
Query Conservation                










   
   
            
Alig confidence 



























..














Template Conservation   
 
 
 
 

 

 
 


 


    ..
     
        
Template Sequence  ERFEHLGLNELKLVKVNKRILCVTSEKF. . DVVKEKLVDLIGDNP
Template Known Secondary structure  TTGGGGT
TT

SSS
SS
..TTST
Template Predicted Secondary structure 











..



Template SS confidence 












































   465....470.........480.........490.. .......500.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions