Job Description P27128 Confidence 14.75% Date Thu Jan 5 11:43:15 GMT 2012 Rank 34 Aligned Residues 89 % Identity 11% Template c3lmaC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:stage v sporulation protein ad (spovad); PDBTitle: crystal structure of the stage v sporulation protein ad2 (spovad) from bacillus licheniformis. northeast structural3 genomics consortium target bir6. Resolution 1.99 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																.				.																																.	.
Query SS confidence																.				.																																.	.
Query Sequence		L	F	G	C	G	I	S	I	A	S	I	L	K	Y	.	N	E	G	.	S	R	L	C	F	H	I	F	T	D	Y	F	G	D	D	D	R	K	Y	F	D	A	L	A	L	Q	Y	K	T	R	I	.	.	K	I	Y	L	I	N	G	D	R	L	R	S	L	P	S	T	K	N	W	T	H	A	I	Y	F	R	F	V
Query Conservation																.				.																																.	.
Alig confidence																.				.						.																										.	.												.
Template Conservation																										.																																							.
Template Sequence		A	P	A	A	A	D	T	I	K	Q	H	L	E	D	L	G	R	T	P	D	D	Y	D	L	.	I	L	T	G	D	L	S	G	V	G	S	P	I	L	K	D	L	L	K	E	E	G	I	N	V	G	T	K	H	N	D	C	G	L	X	I	Y	T	.	P	D	S	G	C	A	C	S	A	V	V	T	F	A	H	I
Template Known Secondary structure																	T			G	G	G		S		.				S	S																T	T				G	G	G				G	G	G	T	S	S		.															T
Template Predicted Secondary structure																										.																																							.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	Y	F	I	N	K	A	P	K	V	L	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	E	I	E	A	G	R	L	N	R	V	L	V	V
Template Known Secondary structure							T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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