Return to main results Retrieve Phyre Job Id

Job DescriptionP27128
Confidence2.98%DateThu Jan 5 11:43:15 GMT 2012
Rank98Aligned Residues138
% Identity14%Templatec2qkxA_
PDB info PDB header:transferaseChain: A: PDB Molecule:bifunctional protein glmu; PDBTitle: n-acetyl glucosamine 1-phosphate uridyltransferase from mycobacterium2 tuberculosis complex with n-acetyl glucosamine 1-phosphate
Resolution2.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.........90.........100.........110.........120.....
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  SIASILKYNEGSRLCFHIFTDYFGDDDRKYFDALALQYKTRIKIYLINGDRLRSLPSTKNWTHAIYFRFVIADYFINKAP
Query Conservation   
 

  

      
 

   

      
  
       
    
              
   
 

 

 


    
Alig confidence 










...


































..........




















Template Conservation   
  
   

 ... 
 

       
   
          
       ..........  
   

             
Template Sequence  VLHAIAKLAPQ. . . RLIVVLGHDHQRIAPLVGELADTLGRTIDVALQDR. . . . . . . . . . PLGTGHAVLCGLSALPDDYAG
Template Known Secondary structure 

S...
TTTTS



S..........


TTS
TT

S
Template Predicted Secondary structure 



...









..........








Template SS confidence 















































































   40.........50 .........60.........70.........80..... ....90.........100......
 
   126...130.... .....140.........150....... ..160.........170.........180........
Predicted Secondary structure 

..








...............

















Query SS confidence 








. .






















. . . . . . . . . . . . . . .






























Query Sequence  KVLYLDADI. . ICQGTIEPLINFSFPDDKVAMVV. . . . . . . . . . . . . . . TEGQADWWEKRAHSLGVAGIAKGYFNSGFLL
Query Conservation 





 

..

  

  
   

     


 ...............
                      







Alig confidence 








..






















...............






























Template Conservation    

   
               
       

                     
    

           
   


 
Template Sequence  NVVVTSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQDHEVMAIVEQTDATPSQREIREVNAGVYA
Template Known Secondary structure  SS
TT

TT
S
S

TTS

TTS

TTT

TTTTS

Template Predicted Secondary structure 






























Template SS confidence 















































































   107..110.........120.........130.........140.........150.........160.........170.........180......
 
   189190......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  INTAQWAA
Query Conservation 


   
 
Alig confidence 







Template Conservation       
  
Template Sequence  FDIAALRS
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   187..190....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions