Job Description P27128 Confidence 75.98% Date Thu Jan 5 11:43:15 GMT 2012 Rank 14 Aligned Residues 185 % Identity 12% Template c2p73A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative glycosyltransferase (mannosyltransferase) involved PDBTitle: crystal structure of a glycosyltransferase involved in the2 glycosylation of the major capsid of pbcv-1 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.							.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		C	F	H	I	F	T	D	Y	F	G	D	D	.	.	.	.	.	.	D	R	K	Y	F	D	A	L	A	L	Q	Y	K	T	R	I	K	I	Y	L	I	N	G	D	R	L	R	S	L	P	S	T	K	N	W	T	H	A	I	Y	F	R	F	V	I	A	D	Y	F	I	N	K	A	P	K	V	L	Y	L	D	A	D
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.														.	.																												.								.
Template Conservation																																	.	.																												.								.
Template Sequence		C	I	T	I	L	S	G	H	F	P	K	E	T	I	Y	A	R	K	T	K	E	L	V	E	E	Y	C	S	I	H	G	.	.	Y	N	F	Y	Y	E	E	S	E	P	L	E	T	E	E	H	A	L	H	F	R	R	S	W	I	I	Q	.	Q	A	A	E	K	F	P	.	S	T	E	W	F	L	W	L	D	S	D
Template Known Secondary structure										S	S	T	T																			T	.	.								S			S			S							T							.							T	.	T		S							T	T
Template Predicted Secondary structure																																	.	.																												.								.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	C	Q	G	T	I	E	P	L	I	N	F	S	F	P	D	D	K	V	A	M	V	V	T	E	G	Q	A	D	W	W	E	K	R	A	H	S	L	G	V	A	G	I	A	K	G	Y	F	N	S	G	F	L	L	I	N	T	A	Q	W	A	A	Q	Q	V	S	A	R	A	I	A	M	L	N	E	P	E	I	I
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.																																	.	.	.														.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.																																	.	.	.														.	.	.	.
Template Sequence		V	Y	V	N	P	.	.	.	.	.	.	.	.	K	N	K	N	K	P	I	T	S	F	I	D	L	S	D	P	N	I	L	Y	H	T	F	H	E	A	P	W	G	S	Y	P	.	.	.	I	N	T	G	V	K	F	V	H	K	D	A	L	.	.	.	.	E	I	E	K	I	V	W	S	L	R	N	E	A	P	W
Template Known Secondary structure						T	.	.	.	.	.	.	.	.	T	T	T	T	S		G	G	G	T						T	T									T	T	T	S	S	S	S	.	.	.			T	T						G	G	G		.	.	.	.									T	T	T	S	T	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.																																	.	.	.														.	.	.	.
Template SS confidence
		81	.	.	.	.									.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.					.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																	.	.	.	.
Query SS confidence																	.	.	.	.
Query Sequence		K	K	I	T	H	P	D	Q	D	V	L	N	M	L	L	.	.	.	.	A	D	K	L	I	F	A	D	I	K	Y	N	T	Q	F	S	L	N	Y	Q	L	K	E	S	F	I	N	P	V	T	N	D	T	I	F	I	H	Y	I	G	P	T	K
Query Conservation																	.	.	.	.
Alig confidence																	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		N	T	F	P	Y	E	Q	K	T	V	Y	E	Y	V	F	P	R	I	P	G	R	Y	I	V	H	D	P	Y	T	L	N	C	I	.	.	.	.	.	.	.	.	V	K	A	Y	P	E	H	V	K	D	A	L	F	V	H	M	C	G	T	S	R
Template Known Secondary structure		T	S	T	T	T								T					S	T	T	S							T	T	T	S			.	.	.	.	.	.	.	.	T	T	T		T	T	T	G	G	G		S					T	T
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions