Job Description P27128 Confidence 96.20% Date Thu Jan 5 11:43:15 GMT 2012 Rank 8 Aligned Residues 153 % Identity 16% Template c2ffuA_ PDB info PDB header:transferase Chain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2; PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2 Resolution 1.64 Å

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		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		L	C	L	D	I	A	Y	G	T	D	K	N	F	L	F	G	C	G	I	S	I	A	S	I	L	K	Y	N	E	G	S	R	L	.	C	F	H	I	F	T	D	Y	F	G	D	D	D	R	K	Y	F	D	A	L	A	L	Q	Y	K	T	R	I	K	I	Y	L	I	N	G	D	R	L	R	S	L	P	S	T	K	N
Query Conservation																																			.
Alig confidence																																			.																		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	T	S	V	V	I	T	F	H	N	E	A	R	S	A	L	L	R	T	V	V	S	V	L	K	K	S	P	P	H	L	I	K	E	I	I	L	V	D	D	Y	S	N	D	P	E	D	G	A	L	.	.	.	.	L	G	K	I	E	K	V	R	V	L	R	N	D	.	.	.	.	.	.	.	.	.	.	.	R
Template Known Secondary structure											S	S																	S		G	G	G										S		S		T					G	.	.	.	.	G	G	G	B	T	T							S	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																					.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.												200
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	T	H	A	I	Y	F	R	F	V	I	A	D	Y	F	I	N	K	A	P	K	V	L	Y	L	D	A	D	I	I	C	Q	G	T	.	I	E	P	L	I	N	F	S	F	P	D	D	K	V	A	M	V	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																				.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.														.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.
Template Sequence		R	E	G	L	M	R	S	R	V	R	G	A	D	A	A	Q	A	K	V	.	.	L	T	F	L	D	S	H	C	E	C	N	E	H	W	L	E	P	L	L	E	R	V	A	E	D	R	T	R	V	V	S	P	I	I	D	V	I	N	M	D	N	F	Q	Y	V	G	A	S	A	D	L	K	G	G	F	D	W	N	L
Template Known Secondary structure																		S	S		.	.						S	S					T	T													T	T												T	T	T								S	S							T	T
Template Predicted Secondary structure																					.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
						159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	E	G	Q	A	D	W	W	E	K	R	A	H	S	L	G	V	A	G	I	A	K	G	Y	F	N	S	G	F	L	L	I	N	T	A	Q	W	A	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		V	F	K	W	D	Y	M	T	P	E	Q	R	R	S	R	Q	G	N	P	V	A	P	I	K	T	P	M	I	A	G	G	L	F	V	M	D	K	F	Y	F	E	E
Template Known Secondary structure																T	S	S		T	T	S					S	S			S	S	S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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