Job Description P27128 Confidence 100.00% Date Thu Jan 5 11:43:15 GMT 2012 Rank 6 Aligned Residues 228 % Identity 18% Template c1zctB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycogenin-1; PDBTitle: structure of glycogenin truncated at residue 270 in a2 complex with udp Resolution 2.60 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		I	A	Y	G	T	D	K	N	F	L	F	G	C	G	I	S	I	A	S	I	L	K	Y	N	E	G	S	R	L	C	F	H	I	F	T	D	Y	F	G	D	D	D	R	K	Y	F	D	A	L	A	L	Q	Y	K	T	R	I	K	I	Y	L	I	N	G	D	R	L	R	S	L	P	.	S	T	K	N	W	T	H	A
Query Conservation																																																																									.
Alig confidence																																			.																	.	.	.																			.
Template Conservation																																			.																	.	.	.
Template Sequence		V	T	L	T	T	N	D	A	Y	A	K	G	A	L	V	L	G	S	S	L	K	Q	H	R	T	S	R	R	L	A	V	L	T	.	T	P	Q	V	S	D	T	M	R	K	A	L	E	I	V	F	.	.	.	D	E	V	I	T	V	D	I	L	D	S	G	D	S	A	H	L	T	L	M	K	R	P	E	L	G	V
Template Known Secondary structure						S	S																	T	T			S							.		T	T	S													.	.	.	S							T	T	S	T	T	S	T	T								T	T
Template Predicted Secondary structure																																			.																	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	F	R	F	V	I	A	D	Y	F	I	N	K	A	P	K	V	L	Y	L	D	A	D	I	I	C	Q	G	T	I	E	P	L	I	N	F	S	F	P	D	D	K	V	A	M	V	V	T	E	G	Q	A	D	W	W	E	K	R	A	H	S	L	G	V	A	G	I	A	K	G	Y	F	N	S	G	F	L	L	I
Query Conservation
Alig confidence														.	.																									.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																									.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	T	K	L	H	C	W	S	L	T	Q	.	.	Y	S	K	C	V	F	M	D	A	D	T	L	V	L	A	N	I	D	D	L	F	E	R	E	.	.	.	.	E	L	S	A	A	P	D	P	G	W	P	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	F	N	S	G	V	F	V	Y
Template Known Secondary structure						G	G	G	G	G		T	T	.	.		S							T	T					S			G	G	G	G	G	S		.	.	.	.	S	S						T	T	S	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure														.	.																									.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.					.	.	120	.	.	.	.	.	.	.	.	.																		130	.	.	.	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		N	T	A	Q	W	A	A	Q	Q	V	S	A	R	A	I	A	M	L	N	E	P	E	I	I	K	K	I	T	H	P	D	Q	D	V	L	N	M	L	L	A	D	.	.	.	.	.	K	L	I	F	A	D	I	K	Y	N	T	Q	F	S	L	N	Y	Q	L	K	E	S	F	I	N	P	V	T	N	D	T	I	F	I
Query Conservation																																											.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																		.	.	.	.	.																				.
Template Conservation																			.	.	.	.	.	.	.																																										.
Template Sequence		Q	P	S	V	E	T	Y	N	Q	L	L	H	V	A	S	E	Q	.	.	.	.	.	.	.	G	S	F	D	G	G	D	Q	G	L	L	N	T	F	F	N	S	W	A	T	T	D	I	R	K	H	L	P	F	I	Y	N	L	S	S	I	S	I	Y	S	Y	.	L	P	A	F	K	A	F	G	A	N	A	K	V	V
Template Known Secondary structure																			.	.	.	.	.	.	.			T	T	S	S									T	T	T	T	T	T	S		G	G	G	B			G	G	G	S			T	T	G	G	G	T	S	.								G	G	G
Template Predicted Secondary structure																			.	.	.	.	.	.	.																																										.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.													280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Y	I	G	P	T	K	P	W	H	D	W	A	W	D	.	.	.	.	.	.	.	.	.	.	.	.	Y	P	V	S	Q	A	F	M	E	A	K	N	A	S
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	F	L	G	Q	T	K	P	W	N	Y	T	Y	D	T	K	T	K	S	V	R	S	E	G	H	D	P	P	Q	F	L	N	V	W	W	D	I	F	T	T	S
Template Known Secondary structure					S	S			G	G	G	S				T	T	T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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