Job Description P43671 Confidence 27.31% Date Thu Jan 5 12:02:24 GMT 2012 Rank 36 Aligned Residues 112 % Identity 11% Template d1szia_ SCOP info Four-helical up-and-down bundle Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain Mannose-6-phosphate receptor binding protein 1 (Tip47), C-terminal domain Resolution 2.80

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		415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.			.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		A	Q	I	Q	Q	R	L	M	E	A	L	D	K	I	N	K	L	P	L	N	P	M	I	E	Q	A	T	S	T	L	S	E	S	Q	R	T	M	K	N	L	Q	T	T	L	D	S	M	N	K	I	L	A	S	.	.	Q	S	M	Q	Q	L	P	T	D	M	Q	S	T	L	R	E	L	N	R	S	M	Q	G	F	Q
Query Conservation																																																							.	.
Alig confidence																																																							.	.
Template Conservation
Template Sequence		Q	E	T	L	Q	Q	L	T	S	V	L	G	L	M	E	S	V	K	Q	A	K	P	E	Q	V	E	A	R	A	L	S	M	F	R	D	I	T	Q	Q	L	Q	S	M	C	V	A	L	G	A	S	I	Q	G	L	P	S	H	V	R	E	Q	A	Q	Q	A	R	S	Q	V	N	D	L	Q	A	T	F	S	G	I	H
Template Known Secondary structure																							S																												T	T	T	T	S																						G	G	G
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		493	.	.	.	.	.	.	500		.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		P	G	S	A	A	Y	N	K	.	M	V	A	D	M	Q	R	L	D	Q	V	L	R	E	L	Q	P	V	L	K	T	L	N	E	K	S
Query Conservation										.
Alig confidence										.
Template Conservation
Template Sequence		S	F	Q	D	L	S	A	G	V	L	A	Q	T	R	E	R	I	A	R	A	R	E	A	L	D	N	T	V	E	Y	V	A	Q	N	T
Template Known Secondary structure		S	G	G	G																													T
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions