Job Description P43671 Confidence 18.13% Date Thu Jan 5 12:02:24 GMT 2012 Rank 55 Aligned Residues 101 % Identity 12% Template c3o0lB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of a pfam duf1425 family member (shew_1734) from2 shewanella sp. pv-4 at 1.81 a resolution Resolution 1.81 Å

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		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		L	D	S	K	K	A	G	Q	L	S	P	G	D	P	V	L	F	R	G	Y	R	V	G	S	V	E	T	S	T	F	D	T	Q	K	R	N	I	S	Y	Q	L	F	I	N	A	P	Y	D	R	L	V	T	N	N	V	R	F	.	.	W	K	D	S	G	I	A	V	D	L	T	S	A	G	M	R	V	E	M	G	S
Query Conservation																																																											.	.
Alig confidence																															.	.	.																										.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	X	I	S	S	T	G	E	V	R	V	D	N	G	S	F	H	S	D	V	D	V	S	A	V	T	T	Q	A	.	.	.	E	A	G	F	L	R	A	R	G	T	I	I	S	K	S	P	K	D	Q	R	L	Q	Y	K	F	T	W	Y	D	I	N	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	S							T	T															.	.	.		T	T												S	S	S													T	T	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.			.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.
Query SS confidence																																								.	.
Query Sequence		L	T	T	L	L	S	G	G	V	S	F	D	V	P	E	G	L	D	L	G	Q	P	V	A	P	K	T	A	F	V	L	Y	D	D	Q	K	S	I	.	.	Q	D	S	L	Y	T	D	H	I	D	Y	L	M	F	F	K	D	S	V	R
Query Conservation																																								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	D	E	G	V	S	W	K	S	L	K	L	H	G	K	Q	Q	X	Q	V	T	A	L	S	P	N	A	T	A	V	R	C	E	L	Y	V	R	E	A	I	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					T	T										T	T										S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																			86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions