Return to main results Retrieve Phyre Job Id

Job DescriptionP43671
Confidence10.00%DateThu Jan 5 12:02:24 GMT 2012
Rank87Aligned Residues12
% Identity17%Templatec3dshA_
PDB info PDB header:dna binding proteinChain: A: PDB Molecule:interferon regulatory factor 5; PDBTitle: crystal structure of dimeric interferon regulatory factor 5 (irf-5)2 transactivation domain
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   176...180.......
Predicted Secondary structure 

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Query Sequence  VLFRGYRVGSVE
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Template Conservation 
 


  
    
Template Sequence  FQYRGRPPRALT
Template Known Secondary structure  TTS

Template Predicted Secondary structure 

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   244.....250.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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