Job Description P43671 Confidence 20.96% Date Thu Jan 5 12:02:24 GMT 2012 Rank 50 Aligned Residues 137 % Identity 15% Template c2nrjA_ PDB info PDB header:toxin Chain: A: PDB Molecule:hbl b protein; PDBTitle: crystal structure of hemolysin binding component from2 bacillus cereus Resolution 2.03 Å

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		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.										.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	P	T	V	S	G	G	L	A	Q	I	Q	Q	R	L	M	E	A	L	D	K	I	N	K	L	.	.	.	.	.	.	.	.	.	P	L	N	P	M	I	E	Q	A	T	S	T	L	S	E	S	Q	R	T	M	K	N	L	Q	T	T	L	D	S	M	N	K	I	L	A	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	D	L	R	G	E	I	Q	Q	N	Q	K	Y	A	Q	Q	L	I	E	E	L	T	K	L	R	D	S	I	G	H	D	V	R	A	F	G	S	N	K	E	L	L	Q	S	I	L	K	N	Q	G	A	D	V	D	A	D	Q	K	R	L	E	E	V	L	G	S	V	N	Y	Y	K	Q	L	E	G	F	N	V	X
Template Known Secondary structure																																																			T	T														T	G	G	G		G	G	G						G	G	G
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
																							467	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	S	M	Q	Q	L	P	T	D	M	Q	S	T	L	R	E	L	N	R	S	M	Q	G	F	Q	P	G	S	A	A	Y	N	K	M	V	A	D	M	Q	R	L	D	Q	V	L	R	E	L	Q	P	V	L	K	T	L	N	E	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	A	I	L	G	L	P	I	I	G	G	I	I	V	G	V	A	R	D	N	L	G	K	L	E	P	L	L	A	E	L	R	Q	T	V	D	Y	K	V	T	L	N	R	V	V	G	V	A	Y	S	N	I	N	E	X	H	K	A	L	D	D	A	I	N	A	L	T	Y	X	S	T	Q	W	H	D	L	D	S	Q
Template Known Secondary structure		T	S								T	T	T							G	G	G													S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
		526	.	.	.	530				.	.	.	.	.	.	.	.	.	540	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		S	N	A	L	V	.	.	.	F	E	A	K	D	K	K	D	P	E	P	K	R
Query Conservation							.	.	.
Alig confidence							.	.	.
Template Conservation
Template Sequence		Y	S	G	V	L	G	H	I	E	N	A	A	Q	K	A	D	Q	N	K	F	K
Template Known Secondary structure													T	T			S	T	T	T	T	G
Template Predicted Secondary structure
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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