Job Description P43671 Confidence 67.88% Date Thu Jan 5 12:02:24 GMT 2012 Rank 13 Aligned Residues 86 % Identity 17% Template c2ieqC_ PDB info PDB header:viral protein Chain: C: PDB Molecule:spike glycoprotein; PDBTitle: core structure of s2 from the human coronavirus nl63 spike2 glycoprotein Resolution 1.75 Å

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		435	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	I	E	Q	A	T	S	T	L	S	E	S	Q	R	T	M	K	N	L	Q	T	T	L	D	S	M	N	K	I	L	A	S	Q	S	M	Q	Q	L	P	T	D	M	Q	S	T	L	R	E	L	N	R	S	M	Q	G	F	Q	P	G	S	A	A	Y	N	K	M	V	A	D	M	Q	R	L	D	Q	V	L	R	E
Query Conservation
Alig confidence																																		.	.																					.
Template Conservation																																		.	.																					.
Template Sequence		K	A	I	N	N	I	V	A	S	F	S	S	V	N	D	A	I	T	Q	T	A	E	A	I	H	T	V	T	I	A	L	N	.	.	K	I	Q	D	V	V	N	Q	Q	G	S	A	L	N	H	L	T	S	Q	L	.	T	Y	L	N	L	S	S	E	L	K	Q	L	E	A	K	T	A	S	L	F	Q	T	T	V	E
Template Known Secondary structure																																		.	.																					.
Template Predicted Secondary structure																																		.	.																					.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.			.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		515	.	.	.	.	520	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	P	V	L	K	T	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	G	L	I	D	Q	I	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions