Job Description P43671 Confidence 35.11% Date Thu Jan 5 12:02:24 GMT 2012 Rank 28 Aligned Residues 108 % Identity 15% Template c1wyyB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:e2 glycoprotein; PDBTitle: post-fusion hairpin conformation of the sars coronavirus spike2 glycoprotein Resolution 2.20 Å

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		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.			.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Predicted Secondary structure																																																									.	.
Query SS confidence																																																									.	.
Query Sequence		G	L	A	Q	I	Q	Q	R	L	M	E	A	L	D	K	I	N	K	L	P	L	N	P	M	I	E	Q	A	T	S	T	L	S	E	S	Q	R	T	M	K	N	L	Q	T	T	L	D	S	M	N	K	I	L	A	S	.	.	Q	S	M	Q	Q	L	P	T	D	M	Q	S	T	L	R	E	L	N	R	S	M	Q	G
Query Conservation																																																									.	.
Alig confidence																					.																																				.	.
Template Conservation																					.
Template Sequence		T	Q	N	V	L	Y	E	N	Q	K	Q	I	A	N	Q	F	N	K	A	.	I	S	Q	I	Q	E	S	L	T	T	T	S	T	A	L	G	K	L	Q	D	V	V	N	Q	N	A	Q	A	L	N	T	L	V	K	Q	L	S	S	N	F	G	A	I	S	S	V	L	N	D	I	L	S	R	L	D	K	V	E	A	E
Template Known Secondary structure																					.
Template Predicted Secondary structure																					.
Template SS confidence
		894	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.		.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.
		491	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	P	G	S	A	A	Y	N	K	M	V	A	D	M	Q	R	L	D	Q	V	L	R	E	L	Q	P	V	L	K	T	L	N	E
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	V	L	G	D	I	S	G	I	N	A	S	V	V	N	I	Q	K	E	I	D	R	L	N	E	V	A	K	N	L	N	E
Template Known Secondary structure		.	.	.						T	T																						G	G	G
Template Predicted Secondary structure		.	.	.
Template SS confidence
					973	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions