Job Description P43671 Confidence 14.90% Date Thu Jan 5 12:02:24 GMT 2012 Rank 65 Aligned Residues 115 % Identity 10% Template c1rkeA_ PDB info PDB header:cell adhesion, structural protein Chain: A: PDB Molecule:vinculin; PDBTitle: human vinculin head (1-258) in complex with human vinculin2 tail (879-1066) Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		407	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.					.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.		.	.	.	.	.	.	.	480	.
Predicted Secondary structure																											.	.	.	.																																										.
Query SS confidence																											.	.	.	.																																										.
Query Sequence		I	P	T	V	S	G	G	L	A	Q	I	Q	Q	R	L	M	E	A	L	D	K	I	N	K	L	.	.	.	.	P	L	N	P	M	I	E	Q	A	T	S	T	L	S	E	S	Q	R	T	M	K	N	L	Q	T	T	L	D	S	M	N	K	I	L	A	S	Q	S	M	Q	Q	.	L	P	T	D	M	Q	S	T	L
Query Conservation																											.	.	.	.																																										.
Alig confidence																											.	.	.	.																																										.
Template Conservation
Template Sequence		I	P	D	L	T	A	P	V	A	A	V	Q	A	A	V	S	N	L	V	R	V	G	K	E	T	V	Q	T	T	E	D	Q	I	L	K	R	D	M	P	P	A	F	I	K	V	E	N	A	C	T	K	L	V	Q	A	A	Q	M	L	Q	S	D	P	Y	S	V	P	A	R	D	Y	L	I	D	G	S	R	G	I	L
Template Known Secondary structure																									T	T	T	T	T																																T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
		482	.	.	.	.	.	.	.	490	.	.	.																						.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	L	N	R	S	M	Q	G	F	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	A	A	Y	N	K	M	V	A	D	M	Q	R	L	D	Q	V	L	R	E	L	Q	P	V	L	K	T
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	T	S	D	L	L	L	T	F	D	E	A	E	V	R	K	I	I	R	V	C	K	G	I	L	E	Y	L	T	V	A	E	V	V	E	T	M	E	D	L	V	T	Y	T	K	N	L	G	P	G	M	T	K	M	A	K	M	I	D	E
Template Known Secondary structure																																	G	G	G			S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions