Job Description P43671 Confidence 26.99% Date Thu Jan 5 12:02:24 GMT 2012 Rank 37 Aligned Residues 78 % Identity 19% Template c1kqsA_ PDB info PDB header:ribosome Chain: A: PDB Molecule:ribosomal protein l2; PDBTitle: the haloarcula marismortui 50s complexed with a2 pretranslocational intermediate in protein synthesis Resolution 3.10 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.				.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		V	T	L	I	T	A	N	A	E	G	I	E	G	G	K	T	T	I	K	.	.	.	S	R	S	V	D	V	G	V	V	E	S	A	T	L	A	D	D	L	T	H	V	E	I	K	A	R	L	N	S	G	M	E	K	L	L	H	K	D	T	V	F	W	V	V	K	P	Q	I	G	R	E	G	I	S	G	L	G	T
Query Conservation																					.	.	.
Alig confidence																					.	.	.																													.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.											.	.	.	.
Template Sequence		G	T	S	T	F	R	A	P	S	H	R	Y	K	A	D	L	E	H	R	K	V	E	D	G	D	V	I	A	G	T	V	V	D	I	E	H	D	P	A	R	S	A	P	V	A	A	V	E	F	E	.	.	.	.	.	.	.	.	D	G	D	R	R	L	I	L	A	P	.	.	.	.	E	G	V	G	V	G	D	E
Template Known Secondary structure				G	G	G	S			G	G	G												S	S	S													T	T	T	T									T	.	.	.	.	.	.	.	.	T	S								B	.	.	.	.	T	T			T	T
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.											.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.									.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	S	G	V	Y	I	E	L	Q	P	G	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	V	G	V	D	A	E	I	A	P	G	N
Template Known Secondary structure				B	S	T	T			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions