Job Description P76137 Confidence 100.00% Date Wed Jan 25 15:21:05 GMT 2012 Rank 1 Aligned Residues 379 % Identity 56% Template c3rfzB_ PDB info PDB header:cell adhesion/transport/chaperone Chain: B: PDB Molecule:outer membrane usher protein, type 1 fimbrial synthesis; PDBTitle: crystal structure of the fimd usher bound to its cognate fimc:fimh2 substrate Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		M	S	G	Y	T	V	K	P	P	T	G	D	T	N	E	Q	T	.	Q	F	I	D	Y	F	N	L	F	Y	S	K	R	G	Q	E	Q	I	S	I	S	Q	Q	L	G	N	Y	G	T	T	F	F	S	A	S	R	Q	S	Y	W	N	T	S	R	S	D	Q	Q	I	S	F	G	L	N	V	P	F	G	D	I	T	T
Query Conservation																			.
Alig confidence																			.
Template Conservation
Template Sequence		L	V	G	Y	R	Y	S	T	S	G	Y	F	N	F	A	D	T	T	Y	S	R	M	N	Y	N	L	A	Y	N	K	R	G	K	L	Q	L	T	V	T	Q	Q	L	G	R	T	S	T	L	Y	L	S	G	S	H	Q	T	Y	W	G	T	S	N	V	D	E	Q	F	Q	A	G	L	N	T	A	F	E	D	I	N	W
Template Known Secondary structure										T	T									B	S	S					T	T	S															S	S	S													S	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	N	Y	S	Y	S	N	N	I	W	Q	N	D	R	D	H	L	L	A	F	T	L	N	V	P	F	S	H	W	M	R	T	D	S	Q	S	A	F	R	N	S	N	A	S	Y	S	M	S	N	D	L	K	G	G	M	T	N	L	S	G	V	Y	G	T	L	L	P	D	N	N	L	N	Y	S	V	Q	V	G	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	S	Y	S	L	T	K	N	A	W	Q	K	G	R	D	Q	M	L	A	L	N	V	N	I	P	F	S	H	W	L	R	S	D	S	K	S	Q	W	R	H	A	S	A	S	Y	S	M	S	H	D	L	N	G	R	M	T	N	L	A	G	V	Y	G	T	L	L	E	D	N	N	L	S	Y	S	V	Q	T	G	Y
Template Known Secondary structure											S	S	S		S													S	G	G	G	S		T	T			S	G	G	G	G											S	S	S													S	T	T
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	G	G	N	T	S	S	G	T	S	G	Y	S	S	L	N	Y	R	G	A	Y	G	N	T	N	V	G	Y	S	R	S	G	D	S	S	Q	I	Y	Y	G	M	S	G	G	I	I	A	H	A	D	G	I	T	F	G	Q	P	L	G	D	T	M	V	L	V	K	A	P	G	A	D	N	V	K	I	E	N	Q	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	G	G	G	D	G	N	S	G	S	T	G	Y	A	T	L	N	Y	R	G	G	Y	G	N	A	N	I	G	Y	S	H	S	D	D	I	K	Q	L	Y	Y	G	V	S	G	G	V	L	A	H	A	N	G	V	T	L	G	Q	P	L	N	D	T	V	V	L	V	K	A	P	G	A	K	D	A	K	V	E	N	Q	T
Template Known Secondary structure				S	T	T	T															S	S											S	S																T	T						S				S	S							T	T			S		B	B	T	T	S	T
Template Predicted Secondary structure
Template SS confidence
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	H	T	D	W	R	G	Y	A	I	L	P	F	A	T	E	Y	R	E	N	R	V	A	L	N	A	N	S	L	A	D	N	V	E	L	D	E	T	V	V	T	V	I	P	T	H	G	A	I	A	R	A	T	F	N	A	Q	I	G	G	K	V	L	M	T	L	K	Y	G	N	K	S	V	P	F	G	A	I	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	R	T	D	W	R	G	Y	A	V	L	P	Y	A	T	E	Y	R	E	N	R	V	A	L	D	T	N	T	L	A	D	N	V	D	L	D	N	A	V	A	N	V	V	P	T	R	G	A	I	V	R	A	E	F	K	A	R	V	G	I	K	L	L	M	T	L	T	H	N	N	K	P	L	P	F	G	A	M	V
Template Known Secondary structure		T		B			T	T	S					S				T	T	S						B		G	G	G	S		T	T				S		S						B		T	T												S										T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		691	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	H	G	E	N	K	N	G	S	I	V	A	E	N	G	Q	V	Y	L	T	G	L	P	Q	S	G	Q	L	Q	V	S	W	G	K	D	K	N	S	N	C	I	V	E	Y	K	L	P	E	V	S	P	G	T	L	L	N	Q	Q	T	A	I	C	R
Query Conservation
Alig confidence																																		.	.	.
Template Conservation																																		.	.	.
Template Sequence		T	S	E	S	S	Q	S	S	G	I	V	A	D	N	G	Q	V	Y	L	S	G	M	P	L	A	G	K	V	Q	V	K	W	.	.	.	G	E	A	H	C	V	A	N	Y	Q	L	P	P	E	S	Q	Q	Q	L	L	T	Q	L	S	A	E	C	R
Template Known Secondary structure				S	S	S	S							G	G	G									S								S	.	.	.													G	G	G	S	S		S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		771	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.				.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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