Job Description P76137 Confidence 99.94% Date Wed Jan 25 15:21:05 GMT 2012 Rank 2 Aligned Residues 188 % Identity 55% Template c3ohnA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane usher protein fimd; PDBTitle: crystal structure of the fimd translocation domain Resolution 3.01 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	Y	T	V	K	P	P	T	G	D	T	N	E	Q	T	Q	F	I	D	Y	F	N	L	F	Y	S	K	R	G	Q	E	Q	I	S	I	S	Q	Q	L	G	N	Y	G	T	T	F	F	S	A	S	R	Q	S	Y	W	N	T	S	R	S	D	Q	Q	I	S	F	G	L	N	V	P	F	G	D	I	T	T	S	L
Query Conservation
Alig confidence																		.	.
Template Conservation																		.	.
Template Sequence		S	G	Y	F	N	F	A	D	T	T	Y	S	R	M	N	G	.	.	T	D	Y	Y	N	L	A	Y	N	K	R	G	K	L	Q	L	T	V	T	Q	Q	L	G	R	T	S	T	L	Y	L	S	G	S	H	Q	T	Y	W	G	T	S	N	V	D	E	Q	F	Q	A	G	L	N	T	A	F	E	D	I	N	W	T	L
Template Known Secondary structure		T	T								S	S		S				.	.						T	T	S															T	T	T													S	S	S																S	S
Template Predicted Secondary structure																		.	.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.			.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	S	Y	S	N	N	I	W	Q	N	D	R	D	H	L	L	A	F	T	L	N	V	P	F	S	H	W	M	R	T	D	S	Q	S	A	F	R	N	S	N	A	S	Y	S	M	S	N	D	L	K	G	G	M	T	N	L	S	G	V	Y	G	T	L	L	P	D	N	N	L	N	Y	S	V	Q	V	G	N	T	H
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Y	S	L	T	K	N	A	W	Q	K	G	R	D	Q	M	L	A	L	N	V	N	I	P	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	A	S	Y	S	M	S	H	D	L	N	G	R	M	T	N	L	A	G	V	Y	G	T	L	L	E	D	N	N	L	S	Y	S	V	Q	T	G	Y	A	G
Template Known Secondary structure									T	T	T																	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T													T	T	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.															.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	N	T	S	S	G	T	S	G	Y	S	S	L	N	Y	R	G	A	Y	G	N	T	N	V	G	Y	S	R	S	G	D	S	S	Q	I	Y	Y	G	M	S	G	G	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	D	G	N	S	G	S	T	G	Y	A	T	L	N	Y	R	G	G	Y	G	N	A	N	I	G	Y	S	H	S	D	D	I	K	Q	L	Y	Y	G	V	S	G	G	V
Template Known Secondary structure		T	T	S	S														S	S	S											S	S
Template Predicted Secondary structure
Template SS confidence
		613	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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