 |
Job Description | P76137 | Confidence | 5.56% | Date | Wed Jan 25 15:21:05 GMT 2012 |
Rank | 41 | Aligned Residues | 63 |
% Identity | 10% | Template | c2eqnA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:hypothetical protein loc92345; |
PDBTitle: solution structure of the naf1 domain of hypothetical2 protein bc008207 [homo sapiens]
|
Resolution | UNK |
|
 |
  |   |
267 | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | S | L | A | D | N | V | E | L | D | E | T | V | V | T | V | I | P | T | H | G | A | I | A | R | A | T | F | N | A | Q | I | G | G | K | V | L | M | T | L | K | Y | G | N | K | S | V | P | F | G | A | I | V | T | H | G | E | N | K | N | G | S | I | V | A | E |
Query Conservation |   |
  |   |
|
|   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|   | . | . | . |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
|
|   |
|   |
|
|
|   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|   |   |
|
|
|
|   |   |   |
|
|   |   |
|
|   |
|   |
|
Template Sequence |   |
G | E | L | P | S | . |
. |
. |
V | E | E | L | T | I | I | L | P | E | D | I | E | L | K | P | L | G | M | V | S | S | I | I | E | Q | L | V | I | I | E | S | M | T | N | L | P | P | V | N | E | E | T | V | I | F | K | S | D | R | Q | A | A | G | K | I | F | E |
Template Known Secondary structure |   |
|
|
| S | S | . | . | . |
|
|
|
|
|
| B |
|
| T | T | S |
|
|  |  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |
| S | S |
|
|
|
|
| T | T |
|  |  |  |
| T | T | S | B |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
| . | . | . |
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
7 | . | . | 10 | . | |
|
|
. | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|