Return to main results Retrieve Phyre Job Id

Job DescriptionP76137
Confidence13.26%DateWed Jan 25 15:21:05 GMT 2012
Rank20Aligned Residues68
% Identity9%Templatec1h8lA_
PDB info PDB header:carboxypeptidaseChain: A: PDB Molecule:carboxypeptidase gp180 residues 503-882; PDBTitle: duck carboxypeptidase d domain ii in complex with gemsa
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   300.........310 .........320.........330.........340.........350.........360.........
Predicted Secondary structure 


.





























Query SS confidence 










.


























































Query Sequence  GKVLMTLKYGN. KSVPFGAIVTHGENKNGSIVAENGQVYLTGLPQSGQLQVSWGKDKNSNCIVEYKLPEVS
Query Conservation     
  
    .  

 

 
          

  
 
 
        
 
 

      
          
Alig confidence 










.



























.



.
























Template Conservation   

 
 
 
  

 

  
 
 
        
   
 
  . 
 
.
 
 
 


 

      
 
    
Template Sequence  RGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWR. LLVQ. GTYKVTASARGYDPVTKTVEVDSKG
Template Known Secondary structure 
TTT
SB
TT
TT

TTS.


S.
TTB


SS
Template Predicted Secondary structure 


















.

.






Template SS confidence 






































































   304.....310.........320.........330.........340... .... ..350.........360.........370..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions