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18 | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | |
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40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | |
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. | . | . | . | . | . | . | . | 70 | |
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Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |
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|  | . |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
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| . |
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Query Sequence |   |
F | S | S | A | F | M | A | N | A | A | D | V | P | Q | V | K | V | T | V | T | D | K | . |
. |
Q | C | E | P | M | T | I | T | V | N | A | G | K | . |
T | Q | F | I | I | Q | N | H | S | . |
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Q | K | A | L | E | W | E | I | L | . |
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Query Conservation |   |
  |   |   |   |   |   |
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|   |   |   |   |
|   |
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|   | . | . |   |
|   |   |   |   |   |   |   |   |
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|   | . |   |   |
|   |
|   |
|   |   | . | . |   |   |   |   |
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|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
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|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
P | G | G | S | N | V | V | N | E | T | P | A | Q | T | V | E | V | R | A | A | P | D | A | L | A | F | A | Q | T | S | L | S | L | P | A | N | T | V | V | R | L | D | F | V | N | Q | N | N | L | G | V | Q | H | N | W | V | L | V | N | G | G | D | D | V | A | A | A | V | N | T | A | A | Q | N | N | A | D | A | L | F |
Template Known Secondary structure |   |
| B |
| T | T | B |
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| S |
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| S |  |  |  |  |  |  | B |
| S | S | S | S | S | B | S |
| S |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |
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| S | S |
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| B |
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|  |  |  | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
| G | G | G | T | T |
Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
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71 | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
. | . | . | . | . | 100 | . | . | . | . | . | |
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. | . | . | . | 110 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
| . |
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|  |  |  |  |  |
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| . | . | . | . |
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|  |  |  |  |
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Query SS confidence |   |
. |
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. |
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Query Sequence |   |
. |
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K | G | V | M | V | V | E | E | R | E | N | I | A | P | G | F | S | Q | K | M | T | A | N | L | . |
Q | P | G | E | Y | D | M | T | C | G | L | . |
. |
. |
. |
L | T | N | P | K | G | K | L | I | V | K | G |
Query Conservation |   |
. | . | . | . |   |   |   |   |
|   |   |
|   |
|   |
|   |
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|   |
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|   |   |
| . |   |   |
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|   |   | . | . | . | . |   |   |   |   |   |
|   |   |   |
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|   |
Alig confidence |   |
. | . | . | . |
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| . | . | . | . |
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Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |
|   |   |   |
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|   |
|   |
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|   |
|
Template Sequence |   |
V | P | P | P | D | T | P | N | A | L | A | W | T | A | M | L | N | A | G | E | S | G | S | V | T | F | R | T | P | A | P | G | T | Y | L | Y | I | C | T | F | P | G | H | Y | L | A | G | M | K | G | T | L | T | V | T | P |
Template Known Secondary structure |   |
|
|
| T | T |
| T | T |  |  |  |  |
|
|
| B |
| T | T |  |  |  |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |
|
| S | T | T | T | T | T | T | T |
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
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|  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |
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Template SS confidence |   |
|
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  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |