Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB24
Confidence99.08%DateThu Jan 5 11:14:26 GMT 2012
Rank9Aligned Residues88
% Identity18%Templated1nwpa_
SCOP infoCupredoxin-like Cupredoxins Plastocyanin/azurin-like
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   28.30........ .40........ .50.. .......60.... .....70... ..
Predicted Secondary structure 



.









.


.



.....

........................
Query SS confidence 










.









.



.











. . . . .








. . . . . . . . . . . . . . . . . . . . . . . .

Query Sequence  DVPQVKVTVTD. KQCEPMTITV. NAGK. TQFIIQNHSQKA. . . . . LEWEILKGV. . . . . . . . . . . . . . . . . . . . . . . . MV
Query Conservation      
 

  
.  
       . 

 .  
 
 
     ..... 
  
    ........................ 
Alig confidence 










.









.



.











.....








........................

Template Conservation     

 
 
 
 
 
 
  
 
  


 
     
 
 
 
  
 

 

                              
Template Sequence  AECKVTVDSTDQMSFNTKDIAIDKSCKTFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARV
Template Known Secondary structure 



TTS
BS
S
TT
S
SS


B

GGGTTT
GGGTTS
TT
TT
Template Predicted Secondary structure 




































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   76...80.........90... ......100..... ....110.....
Predicted Secondary structure 






....






...





Query SS confidence 

















. . . .











. . .









Query Sequence  VEERENIAPGFSQKMTAN. . . . LQPGEYDMTCGL. . . LTNPKGKLIV
Query Conservation    
 
 
 

 
  

  ....
  


   
  ...     
   
Alig confidence 

















....











...









Template Conservation     
  
 



  





     
 
 
 





 


 
 
 
Template Sequence  IAHTKVIGAGEKDSVTFDVSKLAAGEKYGFFCSFPGHISMMKGTVTL
Template Known Secondary structure 


B
TT
GGGS
TTS


STT
GGGS
Template Predicted Secondary structure 























Template SS confidence 














































   81........90.........100.........110.........120.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions