 |
Job Description | P0AB24 | Confidence | 67.03% | Date | Thu Jan 5 11:14:26 GMT 2012 |
Rank | 138 | Aligned Residues | 77 |
% Identity | 13% | Template | d1kv7a3 |
SCOP info | Cupredoxin-like
| Cupredoxins
| Multidomain cupredoxins
|
Resolution | 1.40 |
|
 |
  |   |
39 | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | |
. | . | . | . | . | . | 70 | . | . | |
. | . | . | . | . | . | . | 80 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
. |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |  |  |
| . |
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
Query Sequence |   |
K | Q | C | E | P | M | T | I | T | V | N | A | G | K | . |
T | Q | F | I | I | Q | N | H | S | Q | K | . |
A | L | E | W | E | I | L | K | G | . |
V | M | V | V | E | E | R | E | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | A | P | G | F | S | Q | K | M | T | A | N | L | Q | P | . |
. |
. |
. |
G |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |
|
|   | . |   |   |
|   |
|   |
|   |   |   |   | . |   |   |
|   |   |
|   |   |   | . |   |   |
|   |   |
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |
|
|   |
|   |   |
|
|   |   |
|   |   | . | . | . | . |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
Template Conservation |   |
  |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
Template Sequence |   |
F | D | M | N | K | P | M | F | A | A | A | K | G | Q | Y | E | R | W | V | I | S | G | V | G | D | M | M | L | H | P | F | H | I | H | G | T | Q | F | R | I | L | S | E | N | G | K | P | P | A | A | H | R | A | G | W | K | D | T | V | K | V | E | G | N | V | S | E | V | L | V | K | F | N | H | D | A | P | K | E | H |
Template Known Secondary structure |   |
|
| T | T |
|
| S |  |  |
|
| S | S | S |
|  |  |  |  |  |  |
| T | T |
|
|
|
|  |  |  |  |  | T | T |
|
| B |  |  |  |  | B | T | T | B |
|
|
| G | G | G | S | S | S | B | S |  |  |  |  | S | S | S |  |  |  |  |  |  |
|
|
| S |
|
|
| G | G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
415 | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . |
  |
  |   |
98 | . | 100 | . | . | . | |
|
|
|
. | . | . | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Y | D | M | T | C | . |
. |
. |
. |
G | L | L | T | N | P | K | G | K | L | I | V |
Query Conservation |   |
|
|   |   |   |
| . | . | . | . |   |   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|
|
|   |
|   |
|   |
|
|
|   |   |
|   |
|
Template Sequence |   |
A | Y | M | A | H | C | H | L | L | E | H | E | D | T | G | M | M | L | G | F | T | V |
Template Known Secondary structure |   |
|  |  |  |  |  | S | S |  |  |  |  |  | T | T |
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
495 | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|