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31 | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | |
. | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | |
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. | . | . | . | . | 70 | . | . | . | |
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. | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
Query SS confidence |   |
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Query Sequence |   |
Q | V | K | V | T | V | T | D | . |
K | Q | C | E | P | M | T | I | T | V | . |
N | A | G | K | . |
T | Q | F | I | I | Q | N | H | S | Q | K | A | . |
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L | E | W | E | I | L | K | G | V | . |
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M | V | V | E | E |
Query Conservation |   |
  |
|   |
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| . |   |   |
|   |   |   |   |   |   |   | . |   |
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|   | . |   |   |
|   |
|   |
|   |   |   |   |   | . | . | . | . | . |   |
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|   |   |
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Alig confidence |   |
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Template Conservation |   |
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|   |
|   |   |   |
|   |
|   |
|   |
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|   |
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|   |
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|   |
|   |
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|   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | V | T | V | D | S | T | D | Q | M | S | F | N | T | K | A | I | E | I | D | K | S | C | K | T | F | T | V | E | L | T | H | S | G | S | L | P | K | N | V | M | G | H | N | W | V | L | S | S | A | A | D | M | P | G | I | A | S | D | G | M | A | A | G | I | D | K | N | Y | L | K | E | G | D | T | R | V | I | A | H |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| T | T | S |
| B | S |
| S |  |  |  |  |
| T | T |
| S |  |  |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |
| B |
|
|  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  |  |
| G | G | G | T | T | S |
| T | T |
| T | T |
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|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
  |   |
79 | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
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. | . | . | . | . | 100 | . | . | . | . | . | |
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. | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
 |
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|  |  |  |  |  |  |  |
| . | . | . | . |
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|  |  |  |  |  |
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| . | . | . |
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|  |  |  |  |
Query SS confidence |   |
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| . |
. |
. |
. |
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| . |
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Query Sequence |   |
R | E | N | I | A | P | G | F | S | Q | K | M | T | A | N | L | . |
. |
. |
. |
Q | P | G | E | Y | D | M | T | C | G | L | . |
. |
. |
L | T | N | P | K | G | K | L | I | V |
Query Conservation |   |
  |
|   |
|   |
|
|   |
|   |   |
|
|   |   |
| . | . | . | . |   |   |
|
|
|   |   |   |
|   |   | . | . | . |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
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| . | . | . | . |
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| . | . | . |
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Template Conservation |   |
|   |   |
|   |
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
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|   |
|
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|   |
|   |
|   |
|
Template Sequence |   |
T | K | I | I | G | A | G | E | K | D | S | V | T | F | D | V | S | K | L | A | A | G | T | D | Y | A | F | F | C | S | F | P | G | H | I | S | M | M | K | G | T | V | T | V |
Template Known Secondary structure |   |
|
|
| B |
| T | T |
|  |  |  |  |  |  |  | G | G | G | S |
| T | T |
|
|  |  |  |  |
|
| S | T | T | G | G | G | T | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |
|
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|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
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|
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|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |