|   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | M | A | N | A | A | D | V | P | Q | V | K | V | T | V | T | D | K | Q | C | E | P | M | T | I | T | V | N | A | G | K | . |
T | Q | F | I | I | Q | N | H | S | Q | K | A | L | E | W | E | I | L | K | G | . |
. |
V | M | V | V | E | E | R | E | N | I | A | P | G | F | S | Q | K | M | T | A | N | L | Q | P | G | E |
Query Conservation |   |
  |   |
|   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|   | . |   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   | . | . |   |   |
|   |   |
|   |
|   |
|   |
|
|   |
|   |   |
|
|   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |
|   |
|
|   |   | . | . |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|   | . |   |   |
|   |
Template Sequence |   |
V | A | A | A | D | V | P | A | D | A | V | V | V | G | I | E | K | M | K | Y | L | T | P | E | V | T | I | K | A | G | E | T | V | Y | W | . |
. |
V | N | G | E | V | M | P | H | N | V | A | F | K | K | G | I | V | G | E | D | A | F | R | G | E | M | M | T | K | D | Q | A | Y | A | I | T | F | N | . |
E | A | G | S |
Template Known Secondary structure |   |
 |  | G | G | G | S |
| T | T |
|  |  |  |  |  |  | T | T |  |  | S | S | S |  |  |  |  |
| T | T |
|  |  |  |  | . | . |  |  |
| S | S | S |
| B |
|
|  |  |
| T | T | T | S | S | S | S |
|  |  |
|
|
| B |
| T | T |  |  |  |  |  |  |  |
| . | S |
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  | . | . |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
| . |
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | |
. | . | . | . |
  |
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | D | M | T | C | G | L | L | T | N | P | K | G | K | L | I | V |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |
|
Template Sequence |   |
Y | D | Y | F | C | T | P | H | P | F | M | R | G | K | V | I | V |
Template Known Secondary structure |   |
 |  |  |  |
| S | S |
| T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . |
  |