|   |
29 | 30 | . | . | . | . | . | . | . | . | |
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
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. | . | . | . | . | . | . | . | 60 | . | . | . | . | |
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. | . | . | . | . | 70 | |
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. | . | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |
| . |
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| . | . |  |  |  |  |  |  |  |  |
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|  | . | . | . | . | . |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
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|  |  |  |
Query SS confidence |   |
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| . |
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| . |
. |
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| . |
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. |
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| . |
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. |
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. |
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. |
. |
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Query Sequence |   |
V | P | Q | V | K | V | T | V | T | D | . |
K | Q | C | E | P | M | T | I | T | V | N | A | G | . |
. |
K | T | Q | F | I | I | Q | N | H | S | Q | K | A | . |
. |
. |
. |
. |
L | E | W | E | I | L | . |
. |
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. |
K | G | V | M | V | V |
Query Conservation |   |
  |   |   |
|   |
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|   |   |
| . |   |   |
|   |   |   |   |   |   |   |   |
|
| . | . |   |   |   |
|   |
|   |
|   |   |   |   |   | . | . | . | . | . |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |
Alig confidence |   |
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| . |
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| . | . |
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| . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |   |
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|   |   |   |
|   |
|   |
|   |
|   |   |
|   |
|   |
|
|   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
S | C | E | T | T | V | T | S | G | D | T | M | T | Y | S | T | R | S | I | S | V | P | A | S | C | A | E | F | T | V | N | F | E | H | K | G | H | M | P | K | T | G | M | G | H | N | W | V | L | A | K | S | A | D | V | G | D | V | A | K | E | G | A | H | A | G | A | D | N | N | F | V | T | P | G | D | K | R | V | I |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  |
| S | S | S |
|
| S |
| S |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |
| B |
|
|  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G | T | T | S |
| T | T |
| T | T |
| S |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
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|  |  |  |
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|  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
|
|
. | . | . | . | . | 100 | . | . | . | . | |
. | . | |
|
. | . | . | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
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|
|  |  |  |  |  |  |  |
| . | . | . | . |
|
|
|
|  |  |  |  |  |
| . |
|
| . | . |
|
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|
|  |  |  |  |
Query SS confidence |   |
|
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|
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|
| . |
. |
. |
. |
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|
| . |
|
| . |
. |
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|
Query Sequence |   |
E | E | R | E | N | I | A | P | G | F | S | Q | K | M | T | A | N | L | . |
. |
. |
. |
Q | P | G | E | Y | D | M | T | C | G | . |
L | L | . |
. |
T | N | P | K | G | K | L | I | V |
Query Conservation |   |
  |
|   |
|   |
|   |
|
|   |
|   |   |
|
|   |   |
| . | . | . | . |   |   |
|
|
|   |   |   |
|   | . |   |   | . | . |   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
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|
| . | . | . | . |
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|
| . |
|
| . | . |
|
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|
Template Conservation |   |
  |   |
|   |   |
|   |
|
|   |
|   |   |
|
|
|
|   |   |
|
|   |   |   |
|   |
|   |
|   |
|
|
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|
|
|   |
|
|
|   |
|   |
|   |
|
Template Sequence |   |
A | F | T | P | I | I | G | G | G | E | K | T | S | V | K | F | K | V | S | A | L | S | K | D | E | A | Y | T | Y | F | C | S | Y | P | G | H | F | S | M | M | R | G | T | L | K | L |
Template Known Secondary structure |   |
 |  |
|
|
| B |
| T | T |
|  |  |  |  |  |  |  | G | G | G |
|
| T | T | S |
|  |  |  |  |
|
| S | T | T |
| T | T | T | S |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
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|
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|
|
|
|
|
|
|
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|
|
|
|
  |   |
82 | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |