 |
Job Description | P0AB24 | Confidence | 98.07% | Date | Thu Jan 5 11:14:26 GMT 2012 |
Rank | 39 | Aligned Residues | 83 |
% Identity | 23% | Template | d1bypa_ |
SCOP info | Cupredoxin-like
| Cupredoxins
| Plastocyanin/azurin-like
|
Resolution | 1.75 |
|
 |
  |   |
31 | . | . | . | . | . | . | . | |
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | K | V | T | V | T | D | . |
. |
K | Q | C | E | P | M | T | I | T | V | N | A | G | K | T | Q | F | I | I | Q | N | H | S | Q | K | A | L | E | W | E | I | L | K | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | M | V | V | E | E | R | E | N | I | A | P | G | F | S | Q | K | M | T | A | N | L | Q | P | G | E |
Query Conservation |   |
  |
|   |
|
|   |   |
| . | . |   |   |
|   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |
|   |
|   |
|   |
|
|   |
|   |   |
|
|   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |
|   |   |
|
| . |
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|   | . |   |   |
|   |
Template Sequence |   |
E | V | L | L | G | S | S | D | G | G | L | A | F | V | P | S | D | L | S | I | A | S | G | E | . |
K | I | T | F | K | N | N | A | G | F | P | H | N | D | L | F | D | K | K | E | V | P | A | G | V | D | V | T | K | I | S | M | P | E | E | D | L | L | N | A | P | G | E | E | Y | S | V | T | L | T | . |
E | K | G | T |
Template Known Secondary structure |   |
 |  |  |  | S |
| T | T | S |
|
| S |  |  | S | S |  |  |  |  |
| T | T |  | . |  |  |  |  |  |  |
| S | S |
|
| B |
|
|  |  |
| T | T | S | S |
| T | T |
|
|  |  |  |  | S |
|
| T | T |
|
| B |
| S | T | T |
|  |  |  |  |  |  |
| . | S |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
| . |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
| . |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
. | . | . | . |
  |
  |   |
99 | 100 | . | . | . | . | . | . | . | . | |
|
. | 110 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
| . | . |
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
Query Sequence |   |
Y | D | M | T | C | G | L | L | T | N | . |
. |
P | K | G | K | L | I | V |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   | . | . |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|   |   |
|   |   |   |
|
|   |
|   |
|   |
|
Template Sequence |   |
Y | K | F | Y | C | A | P | H | A | G | A | G | M | V | G | K | V | T | V |
Template Known Secondary structure |   |
 |  |  |  |
| G | G | G | T | T | T | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|