Job Description P0AB24 Confidence 100.00% Date Thu Jan 5 11:14:26 GMT 2012 Rank 2 Aligned Residues 231 % Identity 17% Template c3pf0A_ PDB info PDB header:unknown function Chain: A: PDB Molecule:imelysin-like protein; PDBTitle: crystal structure of an imelysin-like protein (psyc_1802) from2 psychrobacter arcticum 273-4 at 2.15 a resolution Resolution 2.15 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.						.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																									.	.																																			.	.	.	.	.													.	.	.	.
Query SS confidence																									.	.																																			.	.	.	.	.													.	.	.	.
Query Sequence		I	T	A	Y	K	A	Y	V	M	A	E	T	T	Q	L	V	T	D	T	K	A	F	T	.	.	D	A	I	K	A	G	D	I	E	K	A	K	A	L	Y	A	P	T	R	Q	H	Y	E	R	I	E	P	I	A	E	L	F	S	D	.	.	.	.	.	L	D	G	S	I	D	A	R	E	D	D	Y	.	.	.	.
Query Conservation																									.	.																																			.	.	.	.	.													.	.	.	.
Alig confidence										.															.	.																													.	.					.	.	.	.	.													.	.	.	.
Template Conservation										.																																													.	.
Template Sequence		I	P	A	Y	A	D	A	A	.	K	Q	S	D	L	L	H	D	L	A	Q	K	H	C	Q	K	A	P	V	S	G	D	E	L	Q	A	L	R	D	Q	W	L	V	L	A	Q	A	W	A	S	A	E	X	V	.	.	N	F	G	P	A	T	A	S	X	S	N	L	Y	I	N	Y	Y	P	D	E	R	G	L	V	H
Template Known Secondary structure										.														G	G	G		S	B																							T	T		.	.		S	G	G	G	G	G	G	G											T	T
Template Predicted Secondary structure										.																																													.	.
Template SS confidence
		89	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
																		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	K	A	A	D	P	K	F	T	G	F	H	R	L	E	K	A	L	F	G	D	N	T	T	.	.	.	.	.	K	G	M	D	Q	Y	A	E	Q	L	Y	T	D	V	V	D	L	Q	K	R	I	S	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	G	V	A	D	L	I	T	A	N	P	A	L	T	A	E	Q	L	A	N	E	S	A	V	V	Q	G	I	P	G	L	E	E	A	L	Y	A	N	D	S	L	D	A	G	Q	C	A	Y	V	X	S	A	S	S	A	L	G	T	R	L	K	D	I	E	K	N	W	Q	Q	N	A	I	K	L	L	A	I	D	K	T
Template Known Secondary structure												T	T			T	G	G	G	G	G	S		G	G	G	S											S	S	S	S	B																																		T	T	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
			252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.												.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.				.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure		.																												.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query SS confidence		.																												.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Query Sequence		.	E	L	A	F	P	P	S	K	V	V	G	G	A	A	G	L	I	E	E	V	A	A	S	K	I	S	G	.	.	.	.	.	.	.	.	.	.	.	E	E	D	R	Y	S	H	T	D	L	W	D	F	Q	A	N	V	E	G	S	Q	K	I	V	D	.	.	.	L	L	R	P	Q	L	Q	K	A	N	P	E	L
Query Conservation		.																												.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation
Template Sequence		A	E	S	D	Q	G	L	N	Q	W	F	N	S	L	L	S	L	V	E	T	X	K	S	N	A	I	E	Q	P	L	G	L	S	G	K	A	K	G	H	L	P	A	A	T	A	G	Q	S	R	A	I	I	N	A	K	L	A	T	L	N	K	A	X	T	D	P	V	L	T	A	I	L	G	S	N	N	E	N	T	V
Template Known Secondary structure		T	T																							T	T					T	S	S	S	S			S			T	T	T	T	T	T																		S									T	T	S	S	T
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.		.	.	.	.	370	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		L	A	K	V	D	A	N	F	K	K	V	D	T	I	L	A	K	Y	R	T	K	D	G	F	E	T	Y	D	K	L	T	D	A	D	R	N	A	L	K	G	P	I	T	A	L	A	E	D	L	.	A	Q	L	R	G	V	L	G	L
Query Conservation																																																			.
Alig confidence																					.	.	.	.	.																										.
Template Conservation																					.	.	.	.	.
Template Sequence		A	D	T	L	S	T	A	L	A	D	T	T	A	L	L	A	Q	X	P	.	.	.	.	.	E	D	L	A	T	A	D	K	A	T	Q	Q	E	L	Y	D	H	L	T	N	I	T	R	L	I	K	S	Q	L	I	P	T	L	G	I
Template Known Secondary structure																		T	S		.	.	.	.	.	S	S	G	G	G	S																						T					T	T
Template Predicted Secondary structure																					.	.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.						.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions