 |
Job Description | P0AB24 | Confidence | 94.29% | Date | Thu Jan 5 11:14:26 GMT 2012 |
Rank | 71 | Aligned Residues | 67 |
% Identity | 27% | Template | c2x41A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:beta-glucosidase; |
PDBTitle: structure of beta-glucosidase 3b from thermotoga neapolitana2 in complex with glucose
|
Resolution | 2.05 Å |
|
 |
  |   |
52 | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | |
|
. | . | 80 | . | |
. | . | . | . | . | . | . | . | 90 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 100 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |
|
|  |  |  |  | . | . |  |  |
|
| . |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
. |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | T | Q | F | I | I | Q | N | H | S | Q | K | A | L | E | W | E | I | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | G | V | M | V | V | E | . |
. |
E | R | E | N | . |
I | A | P | G | F | S | Q | K | M | T | A | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | Q | P | G | E | Y | D | M | T |
Query Conservation |   |
  |   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |
|   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   | . | . |
|   |
|   | . |
|   |
|
|   |
|   |   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
| . | . |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|   |
|
|
|   |   |   |
|   |
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|
|   |   |
|   |
|
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|   |
Template Sequence |   |
R | V | Q | Y | R | I | E | N | T | G | G | R | A | G | K | E | V | S | Q | V | Y | I | K | A | P | K | G | K | I | D | K | P | F | Q | E | L | K | A | F | H | K | T | R | L | L | N | P | G | E | S | E | E | V | V | L | E | I | P | V | R | D | L | A | S | F | N | G | E | E | W | V | V | E | A | G | E | Y | E | V | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |
| S | S | S |
| B |
|
|  |  |  |  |  |  |  |
|
|
| S | S | S |
|
|
| S |
|  |  |  |  |  |  |  |
|
|
| B |
| T | T |
|  |  |  |  |  |  |  |  |  | G | G | G | G |
|  |  |
| S | S |
|  |  |  |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
618 | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . |
  |
  |   |
103 | . | . | . | . | . | |
|
|
. | 110 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
| . | . | . |
|
|
|  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | G | L | L | T | N | . |
. |
. |
P | K | G | K | L | I | V | K | G | E |
Query Conservation |   |
|   |   |   |   |   | . | . | . |   |   |
|   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |
|
|   |
|   |   |   |   |   |
|   |   |   |
Template Sequence |   |
V | G | A | S | S | R | N | I | K | L | K | G | T | F | S | V | G | E | E |
Template Known Secondary structure |   |
 |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |
| S |
|
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
698 | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|