Job Description P0AB24 Confidence 35.74% Date Thu Jan 5 11:14:26 GMT 2012 Rank 171 Aligned Residues 48 % Identity 25% Template c1z9oB_ PDB info PDB header:protein binding/lipid binding protein Chain: B: PDB Molecule:vesicle-associated membrane protein-associated protein a; PDBTitle: 1.9 angstrom crystal structure of the rat vap-a msp homology domain in2 complex with the rat orp1 ffat motif Resolution 1.90 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70					.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		K	T	Q	F	I	I	Q	N	H	S	Q	K	A	L	E	W	E	I	L	.	.	.	.	K	G	V	M	V	V	E	E	R	E	N	I	A	P	G	F	S	Q	K	M	T	A	N	L	Q	P	G	E	Y
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.
Template Conservation
Template Sequence		T	T	N	L	K	L	Q	N	P	S	D	R	K	V	C	F	K	V	K	T	T	A	P	R	R	Y	C	V	R	P	N	S	G	V	I	D	P	G	S	I	V	T	V	S	V	M	L	Q	P	F	D	Y
Template Known Secondary structure											S	S	S									S		G	G	G					S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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