Job Description P0AB24 Confidence 98.49% Date Thu Jan 5 11:14:26 GMT 2012 Rank 23 Aligned Residues 93 % Identity 26% Template c1xmeB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:cytochrome c oxidase polypeptide ii; PDBTitle: structure of recombinant cytochrome ba3 oxidase from thermus2 thermophilus Resolution 2.30 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.
Predicted Secondary structure																																					.																																											.
Query SS confidence																																					.																																											.
Query Sequence		F	S	S	A	F	M	A	N	A	A	D	V	P	Q	V	K	V	T	V	T	D	K	Q	C	E	P	M	T	I	T	V	N	A	G	K	.	T	Q	F	I	I	Q	N	H	S	Q	K	A	L	E	W	E	I	L	K	G	V	M	V	V	E	E	R	E	N	I	A	P	G	F	S	Q	K	M	T	A	N	L	.	Q
Query Conservation																																					.																																											.
Alig confidence																																					.										.																.	.	.	.														.
Template Conservation																																															.																.	.	.	.
Template Sequence		P	A	Q	A	V	V	Q	T	G	P	N	Q	Y	T	V	Y	V	L	A	F	A	F	G	Y	Q	P	N	P	I	E	V	P	Q	G	A	E	I	V	F	K	I	T	S	P	D	.	V	I	H	G	F	H	V	E	G	T	N	I	N	V	E	.	.	.	.	V	L	P	G	E	V	S	T	V	R	Y	T	F	K	R
Template Known Secondary structure		G	G	G	S					S	S	S										T	T				S	S	S					T	T	S								B	S	S	.	S							T	T	S	S					.	.	.	.			B	T	B										S
Template Predicted Secondary structure																																															.																.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.		.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		96	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		P	G	E	Y	D	M	T	C	.	.	.	.	.	G	L	L	T	N	P	K	G	K	L	I	V
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.
Template Conservation
Template Sequence		P	G	E	Y	R	I	I	C	N	Q	Y	C	G	L	G	H	Q	N	M	F	G	T	I	V	V
Template Known Secondary structure											S			S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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