 |
Job Description | P0AB24 | Confidence | 91.18% | Date | Thu Jan 5 11:14:26 GMT 2012 |
Rank | 98 | Aligned Residues | 66 |
% Identity | 21% | Template | c1v10A_ |
PDB info |
PDB header:oxidase | Chain: A: PDB Molecule:laccase; |
PDBTitle: structure of rigidoporus lignosus laccase from hemihedrally2 twinned crystals
|
Resolution | 1.7 Å |
|
 |
  |   |
46 | . | . | . | 50 | . | . | |
. | . | . | . | . | . | . | 60 | . | |
. | . | . | . | . | . | . | . | 70 | . | . | |
. | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | |
|
. | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |
| . |
|  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | T | V | N | A | G | K | . |
T | Q | F | I | I | Q | N | H | S | . |
Q | K | A | L | E | W | E | I | L | K | G | . |
V | M | V | V | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | R | E | N | I | A | P | G | F | S | Q | K | M | T | A | N | L | . |
. |
Q | P | G | E | Y | D | M | T | C | G | L | L | T | N | P |
Query Conservation |   |
  |   |   |   |
|
|   | . |   |   |
|   |
|   |
|   |   | . |   |   |   |   |
|   |   |
|   |   |   | . |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . |
|   |
|   |
|   |
|
|   |
|   |   |
|
|   |   |
| . | . |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |
|
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |
|   |
|
|   |
|   |
|
|
|
|   |   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
V | S | V | Q | S | G | K | R | Y | R | F | R | I | V | S | T | S | C | F | P | N | Y | A | F | S | I | D | G | H | R | M | T | V | I | E | V | D | G | V | S | H | Q | P | L | T | V | D | S | L | T | I | F | A | G | Q | R | Y | S | V | V | V | E | A | N | Q | A | V | G | N | Y | W | I | R | A | N | P | S | N | G | R |
Template Known Secondary structure |   |
 |  |  |
| T | T |
|  |  |  |  |  |  |  |  |
|
| S | S |
|
|  |  |  |  |  | T | T |
|
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S | B |  |  |  |
| T | T |
|  |  |  |  |  |  |  |
|
| S |
| S | S |  |  |  |  |  |  |  |  | S | S | S | S |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
193 | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . |
  |
  |   |
110 | . |
Predicted Secondary structure |   |
|
|
Query SS confidence |   |
|
|
Query Sequence |   |
K | G |
Query Conservation |   |
  |
|
Alig confidence |   |
|
|
Template Conservation |   |
  |   |
Template Sequence |   |
N | G |
Template Known Secondary structure |   |
| S |
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
273 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|