Job Description P0AB24 Confidence 93.93% Date Thu Jan 5 11:14:26 GMT 2012 Rank 75 Aligned Residues 94 % Identity 5% Template c1sddB_ PDB info PDB header:blood clotting Chain: B: PDB Molecule:coagulation factor v; PDBTitle: crystal structure of bovine factor vai Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.
Predicted Secondary structure																				.													.	.														.	.	.	.	.	.	.																			.
Query SS confidence																				.													.	.														.	.	.	.	.	.	.																			.
Query Sequence		T	V	T	D	K	Q	C	E	P	M	T	I	T	V	N	A	G	K	.	T	Q	F	I	I	Q	N	H	S	Q	K	A	.	.	L	E	W	E	I	L	K	G	V	M	V	V	E	.	.	.	.	.	.	.	E	R	E	N	I	A	P	G	F	S	Q	K	M	T	A	N	L	Q	.	P	G	E	Y	D	M	T	C
Query Conservation																				.													.	.														.	.	.	.	.	.	.																			.
Alig confidence																				.													.	.														.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		A	I	N	G	M	I	Y	N	L	P	G	L	R	M	Y	E	Q	E	W	V	R	L	H	L	L	N	L	G	G	S	R	D	I	H	V	V	H	F	H	G	Q	T	L	L	E	N	G	T	Q	Q	H	Q	L	G	V	W	P	L	L	P	G	S	F	K	T	L	E	M	K	A	S	K	P	G	W	W	L	L	D	T
Template Known Secondary structure				T	T	B	S	S									T	T													T	T								T	T							S	S	S					S	S					T	T											S	S
Template Predicted Secondary structure
Template SS confidence
		1766	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.
						104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	G	L	L	T	N	P	K	G	K	L	I	V	K	G	E	A	T	A	D	A	A	Q	S	D	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		E	V	G	E	I	Q	R	A	G	M	Q	T	P	F	L	I	V	D	R	E	C	K	M	P	M	G	L	S	T
Template Known Secondary structure								T	T	T										T	T						S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1846	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860	.	.	.	.	.	.	.	.	.	1870	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions