Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB24
Confidence95.22%DateThu Jan 5 11:14:26 GMT 2012
Rank62Aligned Residues84
% Identity15%Templatec1m57H_
PDB info PDB header:oxidoreductaseChain: H: PDB Molecule:cytochrome c oxidase; PDBTitle: structure of cytochrome c oxidase from rhodobacter2 sphaeroides (eq(i-286) mutant))
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50.........60.........70.........80.........90.... .....100... ......110.......
Predicted Secondary structure 





















.



.....









Query SS confidence 


















































.








. . . . .













Query Sequence  MTITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANL. QPGEYDMTC. . . . . GLLTNPKGKLIVKG
Query Conservation        

   
 
 
      
  
     
  
 
 
 

 
  

  
.  


   
.....       
   

 
Alig confidence 



























....


















.








.....












.
Template Conservation 
 
 

    
   


 





 

 ....
  
 




  
         
 
 
 





  

 
   
 

.
Template Sequence  TAMVVPVNKTVVVQVTGADVIHSWTVPA. . . . FGVKQDAVPGRLAQLWFRAEREGIFFGQCSELCGISHAYMPITVKVV.
Template Known Secondary structure  S



BTT
SSS
GG....GT
TT


SS



S

SGGGGS

B.
Template Predicted Secondary structure 









....






















.
Template SS confidence 















































































   196...200.........210.........220... ......230.........240.........250.........260.........270
 
   118.120.........130.........140.........
Predicted Secondary structure 










Query SS confidence 































Query Sequence  EATADAAQSDALLSLGGAITAYKAYVMAETTQ
Query Conservation                   
   
  

  
   
Alig confidence  .................














Template Conservation  .................    
  

      
Template Sequence  . . . . . . . . . . . . . . . . . SEEAYAAWLEQARGG
Template Known Secondary structure  .................
TTTT
Template Predicted Secondary structure  .................



Template SS confidence 































   271........280.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions