Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB24
Confidence94.87%DateThu Jan 5 11:14:26 GMT 2012
Rank65Aligned Residues78
% Identity19%Templatec1kbwA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:major outer membrane protein pan 1; PDBTitle: crystal structure of the soluble domain of ania from2 neisseria gonorrhoeae
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.. .......60.........70..... ....80.........90.... .....100...
Predicted Secondary structure 










.





.............







.



..
Query SS confidence 











.






















. . . . . . . . . . . . .


















.








. .
Query Sequence  CEPMTITVNAGK. TQFIIQNHSQKALEWEILKGVMV. . . . . . . . . . . . . VEERENIAPGFSQKMTANL. QPGEYDMTC. .
Query Conservation 
        

 .  
 
 
      
  
     
.............  
 
 
 

 
  

  
.  


   
..
Alig confidence 











.






















.............


















.








..
Template Conservation       
 
  

 

 



 
        
 

 
 

  

        

  
 

 
  
 
    

 
 
  
 
Template Sequence  TGDNALKAKAGETVRMYVGNGGPNLVSSFHVIGEIFDKVYVEGGKLINENVQSTIVPAGGSAIVEFKVDIPGNYTLVDHS
Template Known Secondary structure  SGGG
TT
SS

T

BSGGGSS

SBS
TT


S
SS
Template Predicted Secondary structure 




































Template SS confidence 















































































   211........220.........230.........240.........250.........260.........270.........280.........290
 
   104.....110........
Predicted Secondary structure  ...










Query SS confidence  . . .














Query Sequence  . . . GLLTNPKGKLIVKGE
Query Conservation  ...       
   

  
Alig confidence  ...














Template Conservation         

   
 
 
 
Template Sequence  IFRAFNKGALGQLKVEGA
Template Known Secondary structure  TS
S
Template Predicted Secondary structure 





Template SS confidence 

















   291........300........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions