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Job DescriptionP18004
Confidence97.53%DateThu Jan 5 11:36:30 GMT 2012
Rank28Aligned Residues185
% Identity15%Templated3dhwc1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution3.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   477..480.........490.........500.........510..... ....520.........530.........540.........550...
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Query Sequence  NTNYNMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVVFDM. . . GDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAER
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Template Sequence  PAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRT. . . . . . . . . .
Template Known Secondary structure 
SS
STTSSTTSS

STT
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   2930.........40.........50.........60.........70.........80.........90........
 
   554.....560.........570.........580.........590.........600.........610.........620.........630...
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Query Sequence  VRDQLSVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANG
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Template Sequence  VFGNVALPLELDNTPKDEVKRRVTELLSLV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . G
Template Known Secondary structure  TTT

TT.................................................S
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   99100.........110.........120........ .
 
   634.....640.........650.........660.........670.........680.........690.........700.........710...
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Query Sequence  TYGQYFNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFI
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Template Sequence  LGDKHDSYPSN. . . . . . . . . . . . . . . . LSGGQKQRVAIARAL. . . . . . . . . . . ASNPKVLLCDEATSAL. . . DPATTRSI
Template Known Secondary structure  TTTTTSS
BS
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SSGGGSS...
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   130.........140 .........150..... ....160.........170. ........
 
   714..... 720.........730.........740.........750.........760..
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Query Sequence  EKGYRT. ARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS
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Template Sequence  LELLKDINRRLGLTILLITHEMDV. . . . . . . . . . . . VKRICDCVAVISNG
Template Known Secondary structure 

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   180.........190.........200... ......210.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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