Return to main results Retrieve Phyre Job Id

Job DescriptionP18004
Confidence97.81%DateThu Jan 5 11:36:30 GMT 2012
Rank12Aligned Residues193
% Identity15%Templated1g6ha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases ABC transporter ATPase domain-like
Resolution1.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   481........490.........500.........510.. .......520.........530.........540.........550........
Predicted Secondary structure 







..




















Query SS confidence 































. .













































Query Sequence  NMAVCGTSGAGKTGLIQPLIRSVLDSGGFAVV. . FDMGDGYKSLCENMGGVYLDGETLRFNPFANITDIDQSAERVRDQL
Query Conservation 
  
 
 





 
   

      
  
 
..

   

  
   


  
      



            
  

Alig confidence 































..


































...........
Template Conservation     


 









 
 
     

 
   
               
    
        

 


...........
Template Sequence  VTLIIGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENL. . . . . . . . . . .
Template Known Secondary structure 
STTSSTTSS

STT
TT

T




GGGGGSB...........
Template Predicted Secondary structure 


































...........
Template SS confidence 















































































   35....40.........50.........60.........70.........80.........90.........100...
 
   559560.........570.........580.........590.........600.........610.........620.........630........
Predicted Secondary structure 




















Query SS confidence 















































































Query Sequence  SVMASPNGNLDEVHEGLLLQAVRASWLAKENRARIDDVVDFLKNASDSEQYAESPTIRSRLDEMIVLLDQYTANGTYGQY
Query Conservation    
      
       
  

   
        
  
   
                     
   
      
  
  
Alig confidence  ........................
























.........





















Template Conservation  ........................                         .........         
  
 
       
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . LIGEICPGESPLNSLFYKKWIPKEE. . . . . . . . . EMVEKAFKILEFLKLSHLYDRK
Template Known Secondary structure  ........................GGGTSTTS

SS



.........TT
GGGTTSB
Template Predicted Secondary structure  ........................










.........






Template SS confidence 















































































   104.....110.........120........ .130.........140.........150
 
   639640.........650.........660.........670.........680.........690.........700.........710........
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  FNSDEPSLRDDAKMVVLELGGLEDRPSLLVAVMFSLIIYIENRMYRTPRNLKKLNVIDEGWRLLDFKNHKVGEFIEKGYR
Query Conservation 
            





  
     
   

  

  
        
     





  

          
    
Alig confidence 


...................
















...........









...
















Template Conservation 
  ...................

 

  

 




  ........... 
 






...  


      
   
 
Template Sequence  AGE. . . . . . . . . . . . . . . . . . . LSGGQMKLVEIGRALMT. . . . . . . . . . . NPKMIVMDEP. . . IAGVAPGLAHDIFNHVL
Template Known Secondary structure  GGG...................S
T...........

SST...TTT

Template Predicted Secondary structure 


...................






...........




...




Template SS confidence 















































































   151.. ......160.........170 .........180 .........190.......
 
   719720.........730.........740.........750.........760..
Predicted Secondary structure 












Query SS confidence 











































Query Sequence  TARRHTGAYITITQNIVDFDSDKASSAARAAWGNSSYKIILKQS
Query Conservation    

 
      

 
 
      
    


 

  

 
   
Alig confidence 




















............










Template Conservation       
 


  

       ............  
 
  
  
Template Sequence  ELKAKGITFLIIEHRLDIVLN. . . . . . . . . . . . YIDHLYVMFNG
Template Known Secondary structure  TT

S

STTGG............G
STT
Template Predicted Secondary structure 




............



Template SS confidence 











































   198.200.........210........ .220.........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions