 |
Job Description | P18004 | Confidence | 95.53% | Date | Thu Jan 5 11:36:30 GMT 2012 |
Rank | 328 | Aligned Residues | 40 |
% Identity | 25% | Template | c3qmzA_ |
PDB info |
PDB header:motor protein | Chain: A: PDB Molecule:cytoplasmic dynein heavy chain; |
PDBTitle: crystal structure of the cytoplasmic dynein heavy chain motor domain
|
Resolution | 6.00 Å |
|
  |   |
477 | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | |
|
|
. | . | . | . | 510 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | T | N | Y | N | M | A | V | C | G | T | S | G | A | G | K | T | G | L | I | Q | P | L | I | R | S | V | L | D | . |
. |
. |
S | G | G | F | A | V | V | F | D | M | G |
Query Conservation |   |
  |   |
|   |
|   |   |
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |   |   |   | . | . | . |   |
|   |   |
|   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
Template Sequence |   |
K | T | Q | Q | A | L | I | L | V | G | K | A | G | C | G | K | T | A | T | W | K | T | V | I | D | A | M | A | I | F | D | G | H | A | N | V | V | Y | V | I | D | T | K |
Template Known Secondary structure |   |
S | S |
|
|
|  |  |  |  |
|
| T | T | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
|
|
|  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2065 | . | . | . | . | 2070 | . | . | . | . | . | . | . | . | . | 2080 | . | . | . | . | . | . | . | . | . | 2090 | . | . | . | . | . | . | . | . | . | 2100 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|