 |
Job Description | P18004 | Confidence | 95.23% | Date | Thu Jan 5 11:36:30 GMT 2012 |
Rank | 393 | Aligned Residues | 38 |
% Identity | 26% | Template | c3exaD_ |
PDB info |
PDB header:transferase | Chain: D: PDB Molecule:trna delta(2)-isopentenylpyrophosphate |
PDBTitle: crystal structure of the full-length trna2 isopentenylpyrophosphate transferase (bh2366) from3 bacillus halodurans, northeast structural genomics4 consortium target bhr41.
|
Resolution | 2.30 Å |
|
  |   |
482 | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | V | C | G | T | S | G | A | G | K | T | G | L | I | Q | P | L | I | R | S | V | L | D | S | G | G | F | A | V | V | F | D | M | G | D | G | Y | K | S | L |
Query Conservation |   |
  |   |
|   |
|   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |
|   |   |
|   |
|
|
|   |   |   |
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|   |   |   | . | . | . |   |   |
|
|
|
|
|
|
|   |
|
|
|
|   |
|
Template Sequence |   |
V | A | I | V | G | P | T | A | V | G | K | T | K | T | S | V | X | L | A | K | R | L | . |
. |
. |
N | G | E | V | I | S | G | D | S | X | Q | V | Y | R | G | X |
Template Known Secondary structure |   |
 |  |  |  |
|
| T | T | S | S |  |  |  |  |  |  |  |  |  |  | T | T | . | . | . | T |  |  |  |  |  |
|
| T | T | T | T | B | T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . |
|
|  |  |  |  |
|
|
|  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|