 |
| Job Description | P18004 | | Confidence | 96.46% | Date | Thu Jan 5 11:36:30 GMT 2012 |
| Rank | 128 | Aligned Residues | 32 |
| % Identity | 22% | Template | c2j37W_ |
| PDB info |
PDB header:ribosome | Chain: W: PDB Molecule:signal recognition particle 54 kda protein |
PDBTitle: model of mammalian srp bound to 80s rncs
|
| Resolution | 8.00 Å |
|
| | |
482 | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . |
| Predicted Secondary structure | |
 | | | |  |
|
|
|
|
|  | | | | | | | | | | | | | |
|
|
| | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
M | A | V | C | G | T | S | G | A | G | K | T | G | L | I | Q | P | L | I | R | S | V | L | D | S | G | G | F | A | V | V | F |
| Query Conservation | |
| |
| |
| |
|
|
|
|
|
| |
| | | |
|
| | | | | | |
| | |
| |
|
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
|
|
|
|
|
| |
| |
|
|
|
|
| |
|
|
|
| | | | |
| |
| |
|
| |
|
|
| Template Sequence | |
I | M | F | V | G | L | Q | G | S | G | K | T | T | T | C | S | K | L | A | Y | Y | Y | Q | R | K | G | W | K | T | C | L | I |
| Template Known Secondary structure | |
| | | |
| S | T | T | S | S | | | | | | | | | | | | | | | T | T |
|
| | | | |
| Template Predicted Secondary structure | |
| | | |
|
|
|
|
|
| | | | | | | | | | | | | | |
|
|
|
| | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
