Job Description P18004 Confidence 97.91% Date Thu Jan 5 11:36:30 GMT 2012 Rank 9 Aligned Residues 176 % Identity 14% Template c1oxtB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter, atp binding protein; PDBTitle: crystal structure of glcv, the abc-atpase of the glucose abc2 transporter from sulfolobus solfataricus Resolution 2.10 Å

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		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.								540	.	.	.	.	.	.	.	.	.	550	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.
Query Sequence		M	A	V	C	G	T	S	G	A	G	K	T	G	L	I	Q	P	L	I	R	S	V	L	D	S	G	G	F	A	V	V	F	D	M	G	D	G	Y	K	S	L	C	E	N	M	G	G	V	Y	L	D	G	E	T	L	R	F	N	.	.	.	.	.	.	.	P	F	A	N	I	T	D	I	D	Q	S	A	E	R	V
Query Conservation																																																												.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	G	I	L	G	P	S	G	A	G	K	T	T	F	M	R	I	I	A	G	L	D	V	P	S	T	G	E	L	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	R	L	V	A	S	N	G	K	L	I	V	P	P	E	D	R	K	I	G	M	V	F	Q	T	W	A	L	Y	P	N	L	T	A
Template Known Secondary structure								T	T	S	S										T	S	S			S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T						T	T			S	S		G	G	G	S							T	T					T	T	S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.															.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	Q	L	S	V	M	A	S	P	N	G	N	L	D	E	V	H	E	G	L	L	L	Q	A	V	R	A	S	W	L	A	K	E	N	R	A	R	I	D	D	V	V	D	F	L	K	N	A	S	D	S	E	Q	Y	A	E	S	P	T	I	R	S	R	L	D	E	M	I	V	L	L	D	Q	Y	T	A	N	G	T
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	E	N	I	A	F	P	L	T	N	M	K	M	S	K	E	E	I	R	K	R	V	E	E	V	A	K	I	L	D	I	H	H	V	L	N	H	F	P	R	E	L	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							G	G	G	T	T	S	S																	T	T		G	G	G	T	T	S		G	G	G	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	Q	Y	F	N	S	D	E	P	S	L	R	D	D	A	K	M	V	V	L	E	L	G	G	L	E	D	R	P	S	L	L	V	A	V	M	F	S	L	I	I	Y	I	E	N	R	M	Y	R	T	P	R	N	L	K	K	L	N	V	I	D	E	G	W	R	L	L	D	F	K	N	H	K	V	G	E	F	I	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	Q	Q	R	V	A	L	A	R	A	L	.	.	.	.	.	.	.	.	.	.	.	V	K	D	P	S	L	L	L	L	D	E	P	.	.	.	F	S	N	L	D	A	R	M	R	D	S	A	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	T	T			S						S	S	.	.	.	S	S	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
																															144	.	.	.	.	.	150	.	.	.	.	.												.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180
		715	.	.	.	.	720		.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		K	G	Y	R	T	A	.	R	R	H	T	G	A	Y	I	T	I	T	Q	N	I	V	D	F	D	S	D	K	A	S	S	A	A	R	A	A	W	G	N	S	S	Y	K	I	I	L	K	Q	S
Query Conservation								.
Alig confidence								.																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	V	K	E	V	Q	S	R	L	G	V	T	L	L	V	V	S	H	D	P	A	D	.	.	.	.	.	.	.	.	.	.	.	.	I	F	A	I	A	D	R	V	G	V	L	V	K	G
Template Known Secondary structure																				S					.	.	.	.	.	.	.	.	.	.	.	.						S							T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.													.	.	.	.	.	.	210	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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