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2 | . | . | . | . | . | . | . | 10 | . | . | |
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. | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | |
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. | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
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. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . |
Predicted Secondary structure |   |
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|  |  |  | . | . | . |  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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Query Sequence |   |
L | H | T | L | H | R | S | P | W | L | T | . |
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D | F | A | A | L | L | R | L | L | S | E | G | D | E | L | L | . |
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L | L | Q | D | G | V | T | A | A | V | D | G | N | . |
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R | Y | L | E | S | L | R | N | A | P | I | K | V | Y | A | L | N | E | D | L | I |
Query Conservation |   |
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|   |   |   |   |   |   |
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Alig confidence |   |
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| . | . | . | . | . |
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Template Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
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|   |
Template Sequence |   |
A | L | Q | I | N | E | G | P | Y | Q | H | Q | A | S | D | S | A | Y | Q | F | A | K | A | A | L | E | K | G | H | E | I | F | R | V | F | F | Y | H | D | G | V | N | N | S | T | R | L | T | T | P | P | Q | D | D | R | H | I | V | N | R | W | A | E | L | A | E | Q | Y | E | L | D | M | V | V | C | V | A | A | A | Q |
Template Known Secondary structure |   |
 |  |  |  |
| S |
| T | T | T | S | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
| G | G | G | G | G | G | G | B | S |
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| T | T | S |
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|  |  |  |  |  |  |  |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
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  |   |
63 | . | . | . | . | . | . | |
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70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . |
Predicted Secondary structure |   |
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|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . |  |
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|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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| . |
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Query Sequence |   |
A | R | G | L | T | G | Q | . |
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I | S | N | D | I | I | L | I | D | Y | T | D | F | V | R | L | T | V | K | H | P | S | Q | M | A |
Query Conservation |   |
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|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
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|   |   |
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|   |
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|   |   |
|   |   |   |
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Alig confidence |   |
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| . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
  |
|
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |   |
|   |   |   |   |   |   |
|
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|   |
Template Sequence |   |
R | R | G | I | V | D | E | G | E | A | S | R | N | G | K | D | A | T | N | I | H | P | K | F | R | I | S | G | L | G | Q | L | V | E | A | A | I | Q | A | D | R | L | V | V |
Template Known Secondary structure |   |
 |  | T |
|
|
|  |  |  |  |  |  |  | T |
| S |
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|
| B |
| T | T |
|  |  |  |
| T |  |  |  |  |  |  |  |  |  | S | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
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|  |  |  |  |
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|  |  |  |
|
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|  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |
Template SS confidence |   |
|
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|
  |   |
84 | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . |
  |