Job Description P0A991 Confidence 98.86% Date Thu Jan 5 11:09:38 GMT 2012 Rank 13 Aligned Residues 187 % Identity 18% Template d1piia2 SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Tryptophan biosynthesis enzymes Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.										.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.
Query Sequence		S	A	G	A	S	F	A	A	N	P	L	Y	F	D	P	K	N	I	V	E	L	A	I	E	A	G	C	N	C	.	.	.	.	.	.	.	.	.	V	A	S	T	Y	G	V	L	A	S	V	S	R	R	Y	A	H	R	I	P	F	L	V	K	L	N	H	N	E	T	L	S	Y	P	N	T	Y	D	Q	T	L	Y
Query Conservation																															.	.	.	.	.	.	.	.	.
Alig confidence				.	.																			.							.	.	.	.	.	.	.	.	.																.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.																			.																															.	.																.	.	.	.	.	.	.	.	.	.
Template Sequence		S	P	.	.	S	K	G	V	I	R	D	D	F	D	P	A	R	I	A	A	I	Y	.	K	H	Y	A	S	A	I	S	V	L	T	D	E	K	Y	F	Q	G	S	F	N	F	L	P	I	V	S	Q	I	A	.	.	P	Q	P	I	L	C	K	D	F	I	I	D	P	Y	Q	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	.	.	T	T			S		S	S											.	T	T	T		S								S	T	T	T				T	T										.	.		S						S				S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure				.	.																			.																															.	.																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		58	.			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	V	E	Q	A	F	N	M	G	A	V	A	V	G	A	T	I	Y	F	G	S	E	E	S	R	R	Q	I	E	E	I	S	A	A	F	E	R	A	H	E	L	G	M	V	T	V	L	W	A	Y	L	R	N	S	A	F	K	K	D	G	V	D	Y	H	V	S	A	D	L	T	G	Q	A	N	H	L	A	A	T
Query Conservation
Alig confidence		.	.																						.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.																						.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	I	Y	L	A	R	Y	Y	Q	A	D	A	C	L	L	M	L	S	V	L	D	D	.	.	.	.	.	.	D	Q	Y	R	Q	L	A	A	V	A	H	S	L	E	M	G	V	L	T	E	V	S	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	Q	E	R	A	I	A
Template Known Secondary structure		.	.							T	T		S						T	T	T				.	.	.	.	.	.													T	T									S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.																						.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.							.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.																				.	.	170	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	D	I	V	K	Q	K	M	A	E	N	N	G	G	Y	K	A	I	N	Y	G	Y	T	D	D	R	V	Y	S	K	L	T	S	E	N	P	I	D	L	V	R	Y	Q	L	A	N	C	Y	M	G	R	A	G	L	I	N	S	G	G	A	A	G	G	E	T	D	L	S	D	A	V	R	T	A	V	I	N	K
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.														.	.	.	.	.							.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.														.	.	.	.	.							.	.	.	.
Template Sequence		L	G	A	K	V	V	G	I	N	N	R	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	L	S	I	D	L	N	R	T	R	E	L	A	P	K	L	G	H	.	N	V	T	V	I	S	E	S	G	I	N	T	Y	.	.	.	.	.	A	Q	V	R	E	L	.	.	.	.
Template Known Secondary structure		T	T		S						S			T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T				T												T	.	T	S						S						.	.	.	.	.							.	.	.	.
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.														.	.	.	.	.							.	.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.																				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220						.	.	.	.	.	.
		311	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	G	G	M	G	L	I	L	G	R	K	A	F	K	K	S	M	A	D	G	V	K	L	I	N	A	V	Q
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		S	H	F	A	N	G	F	L	I	G	S	A	L	M	A	H	D	D	L	H	.	.	A	A	V	R	R	V	L
Template Known Secondary structure		T	T	T		S										T		S				.	.
Template Predicted Secondary structure																						.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.			.	.	.	250	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions