Return to main results Retrieve Phyre Job Id

Job DescriptionP0A991
Confidence50.56%DateThu Jan 5 11:09:38 GMT 2012
Rank395Aligned Residues134
% Identity13%Templated1knwa2
SCOP infoTIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   95....100.........110.........120.........130.........140.........150.. .......160..
Predicted Secondary structure 
























............



Query SS confidence 

























































. . . . . . . . . . . .









Query Sequence  KNIVELAIEAGCNCVASTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYAS. . . . . . . . . . . . VEQAFNMGAV
Query Conservation     
  




 

 
   

       
   
 





  


  
    
 

 
............









Alig confidence 































.
























............









Template Conservation     
  
   

 
 


  

  
   
   . 
 


                  



                 
 
Template Sequence  QATLERVSELQIPVNAGSVDMLDQLGQVSPGH. RVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQRHHLQ
Template Known Secondary structure  T

SSSTT
.
S

SS
TTS

SSSTT


SGGGTT
Template Predicted Secondary structure 








.


























Template SS confidence 















































































   106...110.........120.........130....... ..140.........150.........160.........170.........180....
 
   163......170... ......180.........190.........200.........210.........220.........230.
Predicted Secondary structure 


.




















Query SS confidence 










.

























































Query Sequence  AVGATIYFGSE. ESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSADLTGQANHLAATI
Query Conservation 



 

 


. 
  

 


 




   





  



  
     
 
 





 







Alig confidence 










.





















..

































Template Conservation 
 




 

                     
  ..   





    
               
    
Template Sequence  LVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD. . LQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAR
Template Known Secondary structure 




TT
T

..
S








STT




Template Predicted Secondary structure 










..

















Template SS confidence 





































































   185....190.........200.........210........ .220.........230.........240.........250..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions