 |
Job Description | P0A991 | Confidence | 50.56% | Date | Thu Jan 5 11:09:38 GMT 2012 |
Rank | 395 | Aligned Residues | 134 |
% Identity | 13% | Template | d1knwa2 |
SCOP info | TIM beta/alpha-barrel
| PLP-binding barrel
| Alanine racemase-like, N-terminal domain
|
Resolution | 2.10 |
|
 |
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | N | I | V | E | L | A | I | E | A | G | C | N | C | V | A | S | T | Y | G | V | L | A | S | V | S | R | R | Y | A | H | R | I | P | F | L | V | K | L | N | H | N | E | T | L | S | Y | P | N | T | Y | D | Q | T | L | Y | A | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
V | E | Q | A | F | N | M | G | A | V |
Query Conservation |   |
  |   |   |
|   |   |
|
|
|
|
|   |
|
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|   |   |
|
|
|   |   |
|   |   |   |   |
|   |
|
|   |
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   | . |   |
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Template Sequence |   |
Q | A | T | L | E | R | V | S | E | L | Q | I | P | V | N | A | G | S | V | D | M | L | D | Q | L | G | Q | V | S | P | G | H | . |
R | V | W | L | R | V | N | P | G | F | G | H | G | H | S | Q | K | T | N | T | G | G | E | N | S | K | H | G | I | W | Y | T | D | L | P | A | A | L | D | V | I | Q | R | H | H | L | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T |
|
|  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | S | T | T |
| . |  |  |  |  |  |  |  |
| S |
|
| S | S |
| T | T | S |
|
| S | S | S | T | T |
|
|
| S |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  | T | T |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | |
. | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
  |
  |   |
163 | . | . | . | . | . | . | 170 | . | . | . | |
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | V | G | A | T | I | Y | F | G | S | E | . |
E | S | R | R | Q | I | E | E | I | S | A | A | F | E | R | A | H | E | L | G | M | V | T | V | L | W | A | Y | L | R | N | S | A | F | K | K | D | G | V | D | Y | H | V | S | A | D | L | T | G | Q | A | N | H | L | A | A | T | I |
Query Conservation |   |
|
|
|
|   |
|
|   |
|
|
| . |   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|   |   |   |   |   |
|   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   | . | . |   |   |   |
|
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
L | V | G | I | H | M | H | I | G | S | G | V | D | Y | A | H | L | E | Q | V | C | G | A | M | V | R | Q | V | I | E | F | G | Q | D | . |
. |
L | Q | A | I | S | A | G | G | G | L | S | V | P | Y | Q | Q | G | E | E | A | V | D | T | E | H | Y | Y | G | L | W | N | A | A | R |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|
|
| T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| . | . |
| S |  |  |  |
|
|
|
|
|
|
|
|
| S | T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | |
|
. | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|