Return to main results Retrieve Phyre Job Id

Job DescriptionP0A991
Confidence40.30%DateThu Jan 5 11:09:38 GMT 2012
Rank420Aligned Residues117
% Identity21%Templated1j93a_
SCOP infoTIM beta/alpha-barrel UROD/MetE-like Uroporphyrinogen decarboxylase, UROD
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   153......160.........170.........180.... .....190... ......200.........210.........220.....
Predicted Secondary structure 







.....

..

















Query SS confidence 































. . . . .








. .































Query Sequence  VEQAFNMGAVAVGATIYFGSEESRRQIEEISA. . . . . AFERAHELG. . MVTVLWAYLRNSAFKKDGVDYHVSADLTGQAN
Query Conservation 













 

 


 
  

 


 .....




   
..




  



  
     
 
 





 

Alig confidence 































.....








..















................
Template Conservation       




 
 
 
     


  
 

  
  
 
   

  
    


 

        ................
Template Sequence  IRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASGSGGLLER. . . . . . . . . . . . . . . .
Template Known Secondary structure  TT
S
GGGGGS
TSTT


SS
TTTGGG................
Template Predicted Secondary structure 
















................
Template SS confidence 















































































   198.200.........210.........220.........230.........240.........250.........260.
 
   226...230.........240.........250.........260.........270.........280.........290... ......300
Predicted Secondary structure 





































.....

Query SS confidence 



































































. . . . .






Query Sequence  HLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQLANCYMGRAGLINSGGAA. . . . . GGETDLS
Query Conservation 












 


  

   

                       
   
 
   






 
.....    
 
Alig confidence  ..























...............................










.....






Template Conservation  ..    
      
   

       ...............................
    
 



  

 

 


 
Template Sequence  . . LPLTGVDVVSLDWTVDMADGRRRL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GPNVAIQGNVDPGVLFGSKEFIT
Template Known Secondary structure  ..GGGG

S

TTS
T...............................
SSS

B
GGGGGS
Template Predicted Secondary structure  ..









...............................









Template SS confidence 















































































   262.......270.........280..... ....290.........300........
 
   301........310.........320
Predicted Secondary structure 



Query SS confidence 



















Query Sequence  DAVRTAVINKRAGGMGLILG
Query Conservation    
  

 

 


 




Alig confidence 








..








Template Conservation    
   
  ..    
 

 
Template Sequence  NRINDTVKK. . AGKGKHILN
Template Known Secondary structure  ..
SSSB
Template Predicted Secondary structure  ..




Template SS confidence 



















   309310....... ..320......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions